Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0496 ATGGGACGACTAAAGCTGCAAGCTGGTATCAATTCAATAGACGAGGAAGAACCTGAGGAATGTGATGCTTCCTATCCTAATAAAACAACTTTGGCGTGCATGATCAATTCTGAAATCGGTGCTGTTTTGGCAGTCATGAGAAGAAATGTAAGATGGGGAGGTCGTTATATGTCAGGGGATGATCAGCTGGAGCACTCCCTCATTCAGTCTTTTAAGGCATTAAGGAGACAAATCTTTTCGTGGCACCACCATCAGTGGCAAGCTATCAACCCTGCCTTGTATCTGCAGCCATTTTTAGATGTGATTCGGTCTGATGAAACCGGTGCAGCAATTACTGGTGTTGCTTTGTCGTCTGTTTACAAGATCTTAACTCTTGATGTGAGCGATCAAAATACTGCCAATGTTGACGATGCCATGCACTTGGTGGTTGATGCTGTCACTAGCTGTAGATTTGAGGTCACGGATCCATCTTCGGAAGAAGTTGTTTTAGTGAAGATACTACAAGTTCTCCTAGCATGTATGAAAAGTAAAGCATCTGTAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAGGCGAGGTTTTGCAGCAGATAGCACGGTACACAATGCATGAACTTGTAAGGTGTATTTTTTCTCACCTTCAAGATGTTGGCAACACCGACCATGCATTGGTTAATGGAAGAGCTAATTTGAAACAGGAGACTGGAACTGGAGGCCTAAATAATGAGTATGCTTTTGGAAGTAGACAATTGGAGAATGGTAGCTTGAGTTCTGAATATGATAATCAGTCATTACCCACAAACCTTGCTCCCAATGCTGCAACTGGTGTGACAGCTACTGTGATGGATGAAAACACAGCAATAGCTATTAGTGGCAAGGATGGTGTACACTTTGACATGCATCTGATGACTGAACCATATGGTGTTCCTTGCATGGTGGAAATATTCCACTTTTTGTGTTCTTTGCTGAATGTCGTTGAGCATATGGAAATGGGACCTAGATCAAACACTGTAGCATTTGATGAAGATGTACCCCTCTTTGCTTTAACTTTGATTAATTCTGCTATAGAACTTGGAGGGCCTTCTATTCGGCGTCACCCAAGGTTGCTGAGCTTAATTCAAGATGAACTGTTTCATAATCTGATGCAATTTGGTTTGTCAATGAGTCCCCTTATACTTTCAATTGTGTGTAGCATTGTTCTCAATCTTTATCACAATCTTCGTCCAGAACTCAAATTACAGATAGAAGCATTTTTTTCTTGTGTCATCTTGAGACTTGCACAAGGCAGATATGGGGCTTCTTACCAGCAGCAAGAGGTAGCCATGGAGGCCCTCGTCGACTTCTGCAGGCAAAAAACGTTTATGGTAGATATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCCAGAAGTGCATTTCCTGTGAACTGTCCATTGTCTTCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTCATACAGGGAATGGCTGAAAGAATAGCCAATGGATCTGTAAGCTCAGAATATTCTCCAGTGAATCTTGAAGAGTATACCCCATTCTGGATGGTGAAATGTGAGAATTATAATGATCCAAATCATTGGGTTCCTTTTTCCCGCCGAAGAAAGTACATAAAGAGAAGATTAATGATTGGTGCTGACCACTTTAATCGTGATCCTAAGAAAGGTCTTGAGTTTCTCCAGGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTCCTAGGAAACCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTCCAAGACATGAACTTAGATACAGCACTGCGTTTATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAAAAGATTCATAGGGTGCTTGAAGCCTTCTCTGAGAGATATTATGAACAGTCACCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCTTATTCAATGATAATGCTTAATACAGATCAGCACAATGTGCAGGTTAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCATATAAATGGTGGCAATGATCTTCCTCGAGATTTCCTATCAGAGATTTACCATTCAATTTGTAAGAATGAAATCCGTACAACCCCTGAACAAGGTTTTGGATTTCCCGAAATGACTCCAAGTCGATGGATCGATCTAATGCATAAGTCAAGAAAAACTGCTCCATTTATTGTATCTGATTCCAAGGCCTACCTTGATCATGATATGTTTGCCATAATGTCAGGTCCAACTATTGCTGCCATCTCTGTGGTGTTTGATCATGCTGAACATGAAGAGGTTTGCCAAACATGTGTGGATGGATTCCTAGCTGTTGCTAAGATTTCTGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTGGTAGTGTCTCTTTGTAAGTTCACTACGCTCTTAAACCCGTCATTAGTTGAGGAACCAGTTCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACTGTAACTGTATTCACAATTGCAAATAGGTATGGTGATTACATACGCACAGGTTGGAGGAATATTCTTGATTGCATCTTAAGACTGCACAAGCTTGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGATGAGTCAGAACTTTCTGCTGAAACTGTGCATGGAAAGCCTATTGTGAATTCCTTATCCTCTGCTCATTTGCAGTCTATTGGCACTCCTAGGAGATCTTCAGGATTGATGGGTAGGTTTAGTCAACTCTTATCTCTTGACACTGAAGAGCCAAGATCACAACCTACTGAACAACATGCTGCTCATCAGCGCACCCTTAACACGATAGAGAAGTGTCACATTGACAGCATATTCACAGAGAGTAAATTTCTGCAAGCTGAATCTCTATTGCAGCTTGCCAGAGCGCTCATTTGGGCAGCAGGTCGACCTCAGAAAGGGAACAGCACACCTGAGGATGAAGATACAGCAGTATTCTGCCTGGAGTTACTGATTGCGATCACTTTGAATAACAGGGATAGAATTGGCATTCTCTGGCAGGGTGTTTACGAGCACATATCTAATATTGTTCAGTCAACTGTAATGCCCTGTGCCTTGGTAGAGAAGGCTGTTTTTGGACTTCTGCGGATTTGTCAGCGGTTGCTCCCCTACAAGGAGAACATTGCAGATGAACTTTTGAGATCATTGCAACTTGTCTTGAAGCTTGATGCCCGAGTTGCTGATGCATACTGTGAGCAGATTACTCAGGAAGTCAGTCGCCTTGTGAAGGAAAATGCTTCTCATATAAGATCTCAGTTAGGATGGCGCACAATCACCTCCCTACTTTCAAACATAGCTAGGCACATAGAAGCATCTGAGGCAGGGTTTGATGCACTGTTGTTCATAATGTCCGATGGTGCCAACTTAGTTCCAGCTAATTATGTTCTCTGTATAGATACTGCGAGGCAGTTTGCTGAGTCTCGTGTTGGGCAAGCTGAGCGATCTGTACGAGCACTGGATCTCATGGCAGGATCTGTCAGTTGCTTGGCCCGGTGGACTACCGAGGCTAAGGAAGCAATGGTAGAGGAGCAAATATCTAAGTTGTCACAGGATATTGGAGAGATGTGGTTGAGACTAGTACAGGGTCTAAGGAAGGTGTGTTTAGACCAGAGAGAAGAGGTCAGAAATCATGCTTTATTATCTCTGCAGAGGTGCTTGACAGGAGCTGATGGCATTTATCTCCCATATGGTTTGTGGTTACAATGTTTCGATCTTGTGATCTTTACTGTGCTTGATGACCTGCTAGAGATTGCACAGGGACACTCTCAGAAGGATTACCGCAACATGGAAGGAACCCTTATCTTAGCAATGAAGCTCTTGTCCAAAGTATTTCTCCAGTTACTCCCAGATTTATCACAATTGACAACCTTCTGCAAGCTATGGTTAGGCGTACTGAGCCGAATGGAAAAATACACGAAGGTGAAGGTTAGGGGAAAAAGAAGTGAGAAGCTTCAAGAGACAGTTCCTGAGCTTCTTAAAAACTCCTTGATTGTTATGAAGATGCGTGGTATACTGGTGCAAAGGAGTGCCTTGGGTGGTGATAGTCTGTGGGAATTAACATGGCTTCACGTGAATAACATTTCACCATCACTGCAACTTGAGGTGTTCCCTGAGCAGGATTCTGAACATTTGCAGCATAGACAAGGTGAATCAGTAGGAGGTTTGGTGCCTGATAATTTGGGTTCTGTTCCTTCGAGTGAAACTGGCAATCGTGTAGATGATGGTCATTGTGGTTAA 4425 0.4237 MGRLKLQAGINSIDEEEPEECDASYPNKTTLACMINSEIGAVLAVMRRNVRWGGRYMSGDDQLEHSLIQSFKALRRQIFSWHHHQWQAINPALYLQPFLDVIRSDETGAAITGVALSSVYKILTLDVSDQNTANVDDAMHLVVDAVTSCRFEVTDPSSEEVVLVKILQVLLACMKSKASVMLSNQHVCTIVNTCFRIVHQAGTKGEVLQQIARYTMHELVRCIFSHLQDVGNTDHALVNGRANLKQETGTGGLNNEYAFGSRQLENGSLSSEYDNQSLPTNLAPNAATGVTATVMDENTAIAISGKDGVHFDMHLMTEPYGVPCMVEIFHFLCSLLNVVEHMEMGPRSNTVAFDEDVPLFALTLINSAIELGGPSIRRHPRLLSLIQDELFHNLMQFGLSMSPLILSIVCSIVLNLYHNLRPELKLQIEAFFSCVILRLAQGRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSRSAFPVNCPLSSMHILALDGLIAVIQGMAERIANGSVSSEYSPVNLEEYTPFWMVKCENYNDPNHWVPFSRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPRDFLSEIYHSICKNEIRTTPEQGFGFPEMTPSRWIDLMHKSRKTAPFIVSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVCQTCVDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSLVEEPVLAFGDDMKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETVHGKPIVNSLSSAHLQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQHAAHQRTLNTIEKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKENASHIRSQLGWRTITSLLSNIARHIEASEAGFDALLFIMSDGANLVPANYVLCIDTARQFAESRVGQAERSVRALDLMAGSVSCLARWTTEAKEAMVEEQISKLSQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQRCLTGADGIYLPYGLWLQCFDLVIFTVLDDLLEIAQGHSQKDYRNMEGTLILAMKLLSKVFLQLLPDLSQLTTFCKLWLGVLSRMEKYTKVKVRGKRSEKLQETVPELLKNSLIVMKMRGILVQRSALGGDSLWELTWLHVNNISPSLQLEVFPEQDSEHLQHRQGESVGGLVPDNLGSVPSSETGNRVDDGHCG* 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0496 1474 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1442 - -
Lja6g0496 1474 Pfam Sec7 domain 570 753 IPR000904 GO:0005085|GO:0032012
Lja6g0496 1474 Gene3D - 646 762 IPR023394 -
Lja6g0496 1474 Gene3D - 563 645 - -
Lja6g0496 1474 SUPERFAMILY Sec7 domain 567 757 IPR035999 GO:0005085|GO:0032012
Lja6g0496 1474 SUPERFAMILY ARM repeat 354 1344 IPR016024 -
Lja6g0496 1474 MobiDBLite consensus disorder prediction 1440 1474 - -
Lja6g0496 1474 ProSiteProfiles SEC7 domain profile. 562 751 IPR000904 GO:0005085|GO:0032012
Lja6g0496 1474 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 11 1442 - -
Lja6g0496 1474 SMART sec7_5 566 753 IPR000904 GO:0005085|GO:0032012
Lja6g0496 1474 CDD Sec7 570 753 IPR000904 GO:0005085|GO:0032012
Lja6g0496 1474 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 323 484 IPR032691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0496 Lja-Chr6 11999016 12005515 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0496 K18443 - gmx:100780239 2722.96