Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0495 ATGGGACATCAAAAGATGCAAATGCAAACTGGTTTCAGCGCAATAGAAGACCAATCTGAGCTATGTGGTGCCGGATATCATCACAAAACTACTATAGCATGCATGATCAATGCAGAAATTGGTTCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGGGTTCATTATATGTCAGATGATGACCAATCAGAGCACTTTCTTGTTCAGTCTTTGAAGACACTGAGGAGGCAAATTTTCAATTGGCAGAATCAATGGCATTCCATCAACCCTGCTCTGTATCTCCAGCCATTTCTGGATGTGATTCAATCAGATGAAACTGGTGCACCAATTACTGGTGTTGCTTTGTCATCTGTTTACAAGATCTTAACTCTGGACATGATTGATCAAAACACTGTCAACGTTGGGGATACCATGCACTTGGTGGTTGATGCTGTCACAAGTTGCAGATTTGAGGTGACTGATCCTGGATCAGAAGAAGTGGTATTAATGAAGATTTTACAAGTTCTTCTTGCATGTGTGAAAATTAAAGCTTCTGTAATACTGAGTAACCAACAGGTTTGCACCATTGTGAATACTTGTTTCCGTATAGTTCATCAAGCAGGAACCAAAGGTGAGCTGTTGCAGCGGATAGCACGGTACACAATGCATGAACTCGTTAGGTGTATATTCTCTCACCTTCAGGATATTGACAATACAGAGAGTACATTGATAAATGGGAGAACTACTTCAAAACAAGAGACCAGTGGGCTAAATAATGAGCATGCTTCAGCATGCAGATCATTGGGAAATGGGAGCCTGAATGCTGCATCTGTTGGTCGACCATTTCCCACAGACCTTGCTTCCAGTACTACACCTGTTGTTAGAGTAACTTTAATGCCTGAAAATACAACTAATGCTAGCAGTGGCAAGGAAATTGATCCACTTGAATTGCAGCTCATGACTGAACGTTATGGGGTTCCCTGTATGGTGGAAATATTTCACTTCTTGAGTTCTTTGTTGAATGTTGTTGAGCATATGGGGAAGAACTCTAGATTAAACAAACTAACGTTTGATGAAGATGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGCCATTGAGTTAGGAGGGCCTTCCTTTCACCGTCACCCTAGATTGCTGAGTTTAATTCAGGATGAGTTATTCTGTAATCTTATGCAATTCAGTTCATCAATGAGCCCTCTTGTGCTTTCAATGGTCTGTAGCATTGTTCTCAATTTGTACCACCATCTTCGTACAGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTTAGGCTTGCACAAAGCAAATATGGGGCTTCATATCAGCAACAGGAAGTTGTGATGGAGGCGCTTGTTGATTTTTGCAGGCAAAAGTCATTCATGGCAGAGATGTATGCTAACTTCGATTGTGACATTACTTGCAGTAATGTGTTCGAAGACATTACTAATATGTTGTCTAAAAGTGCATTTCCTGTGAATAGTCCATTATCTTCCATTCATATTCTTGCCCTGGATGGTCTTACTGCTGTAGTGCAGGGAATTGCCGATAGGATAGGTAATGGATCTGTAAATTCAGAACAGTCTCCTGTGAATTTTGAACAGTTTACACCATTCTGGCAGGAAAAGTGTGAAAGTTTTGATGACCCAAATGCATGGGTTCCTTTTGTCCGCCGAAGAAAGTGCTTCAAGAAAAGATTGATGATTGGAGCTGATCATTTCAATCGTGATGTTAAGAAAGGTCTTGAATTTCTCCAAGGAACACATATTTTGCCTGACAAACTTGATTCTGAAAGTGTTGCCTACTTTTTTAGATACACCACTGGGTTGGACAAGAATCTCATTGGTGATTTCCTTGGAAATCATGATGAATTCAGTGTTCAGGTTCTTCATGAGTTTGCTAGAACGTTTGATTTCCAAAATATGACCTTAGACACAGCCCTGCGTCTATTTTTGGAGACTTTTAGGCTTCCTGGAGAATCACAGAAAATACATAGGGTGCTTGAAGCTTTCTCTGAGAGCTACTATGAGCAGTCGCCACATATCCTTGCTAACAAGGATGCTGCTCTTGTGCTGTCATACTCTATTATATTGCTCAATACAGATCAGCACAATGCGCAGGTCAAAAAGAGGATGACAGAAGAGGATTTTATCAGGAATAATAGGCGTATAAATGGTGGCAATGATCTGCCTCGAGAATTCCTATCAGAGATTTACCGTTCAATTTGTAAGAATGAAATCCGCATAACCTGTGAGCCAGGCTTTGTATCTCCTGAGATGACATCAAATCAGTGGATTTCTCTGATGCACAAGTCAACTGCTCCATTCATTGTATCTGATTCCAGAGCATACCTAGATTATGACATGTTTGTTATACTGTCAGGCCCGACAATTGCTTCCATTTCTGTGGTATTTGATAATGCTGAAAATAAAGAGGTATGCCAAACATGTATAGATGGATTCCTAGCTATTGCAAAGATATCAGCTTACTATCAACTAGAAAACGTACTTGATGATCTGGTTGTGTGCCTCTGTAAGTTCTTCACCATTTTGGATCCATTATCAGTTGAGGAATCTGTCTTAGCCTTTGGAGATGACACAAATGCAAGAATGGCAACTGAGACAGTTTTCACTATTGCAAGTAGGTATGGTGATTACATCCGCACAGGGTGGAGGAATATCCTTGATTGCATCTTAAAATTGCACAAGTTAGGCCTTCTTCCTACTAATATAGCCAGTGATACAGCTAGCACGTCAGAGCTTTCTACAGAAAATGGACATGGGCCCAATTCAAATTCTTTATCATCAACTCATCGTCGATCTATTAGCACTCCAAAGAGATCTTCAGGATTATTCAGAAGGTTTAGTCAACTCTTATCTCTTGGCACTGAAGAGTTAATATCAATACCAACTGAAGAACAACTGTTTGCTCATCAGCAAGCTGTACAAACAATTCACAAGTGTCACATTGACAACATATTCATTGAGAGTAAATTTCTGCAAGCTGAATCTCTGATGCAGCTTGCAAGAGCTCTCATTAATGCTGGAGCTCAACGGCAGAAAAGGAACAAAATATCTGAGGATGAAGATGCTTCAGTTTTTTGTCTGGAGTTACTGATAGCAATCACTCTGAATAACAGGGATAGAATTGGACTTCTTTGGAAGAGTGTTTATGAGAACATATCTAATATTGTTAAATCAACTGTGATGCCTTGTGCACTGGTAGAAAAAGCTGTTTTTGGACTTCTTAGGATATGCCATCGCTTACTTCCCTACAAAGAGAACATTACTGATGAACTTTTGAGGTCTCTGCAGCTTATCTTGAAGCTTGATGCTCTGGTTGCAGATGCATACTATGAGAAGATTACACAGGAGGTCTGTCGCCTTGTTAAGGAAAATGCTTCTCATATTAGGTCTCATTTAGGATGGTGCACAGTTACATCACTGCTCTTGATCACTGCAAGACATCTTGAAGCATCTGAGGCTGGATTCGATACGCTGTTGTTTATTATGTCTGATGGAGCTCACTTGCTCCCTGCTAATTATATTCTCTGTGTGGATGTTGCAAGGCAGTTTGCTGAGTCTCGTGTAGGACTGGTAGACCGGTCAGTTGTAGCACTAGATCTTATGGCAGATTCTGTCAATTGTTTAGAGAAGTGGACTAATGATGCGAAGCAAGCAGCCAAAGAAGAGGAAGTGGAAAGTATGTTGCAGGATATTGGGGAAATGTGGTTAAGGTTAGTACAGGGAATAAGGAAAGTATGTTTGGACCAAAGAGAGGAGGTTAGGAATCACGCGGTGTTATCTTTGCAGAAGTGCATGACAGGAGCAGTTGGTACTCATCTTCCATGTGATTTGTCGTTTCAGTATTTTAATCAAGTGATCTTCACCTTGCTGGATGACCTGCTTGAAATTTCTCAGACATACCCTCAAAAGGAATACCGGAACATGGAAGGAACACTTATTGTTGCCTTGAAGCTCTTATTTGAAGTTTTCCTCCAGTTACTCCAAGAACTATCACAATCCGAAGCCTTCTGCAAACTATGGGTGGGTGTGCTAAGCCGTGTGGAAAAATGTGTGAAGATGAAAGGTAGGGGATGGAGAAGTGAGAAGTTTCAAGAGCTTGTGCCTGAGCATCTGAAGAAAACTTTGCTTGTTATGAAATCAGGCGGCATACTAGTTAAGAGCGTCGGCTTAGGTGAAAACAGTTTGTGGGAACTGACATGGCTACATGTGAAAAATATTGCTCCATCCTTGCAGTCTGAGGTGTTCCCTGAGCAAGGTTCAGAACAGTTGAAGTTGCAGCACAAACAGATTGAAACAGTTGGAAGTTTGGAACCTGATGCAAACATTTATGTTCCTTCAAATGAAACAGTGGGCCAAGATGGTGCTGGTATTGGTTAG 4416 0.4062 MGHQKMQMQTGFSAIEDQSELCGAGYHHKTTIACMINAEIGSVLAVMRRNVRWGVHYMSDDDQSEHFLVQSLKTLRRQIFNWQNQWHSINPALYLQPFLDVIQSDETGAPITGVALSSVYKILTLDMIDQNTVNVGDTMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKIKASVILSNQQVCTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQDIDNTESTLINGRTTSKQETSGLNNEHASACRSLGNGSLNAASVGRPFPTDLASSTTPVVRVTLMPENTTNASSGKEIDPLELQLMTERYGVPCMVEIFHFLSSLLNVVEHMGKNSRLNKLTFDEDVPLFALTLINSAIELGGPSFHRHPRLLSLIQDELFCNLMQFSSSMSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVIFRLAQSKYGASYQQQEVVMEALVDFCRQKSFMAEMYANFDCDITCSNVFEDITNMLSKSAFPVNSPLSSIHILALDGLTAVVQGIADRIGNGSVNSEQSPVNFEQFTPFWQEKCESFDDPNAWVPFVRRRKCFKKRLMIGADHFNRDVKKGLEFLQGTHILPDKLDSESVAYFFRYTTGLDKNLIGDFLGNHDEFSVQVLHEFARTFDFQNMTLDTALRLFLETFRLPGESQKIHRVLEAFSESYYEQSPHILANKDAALVLSYSIILLNTDQHNAQVKKRMTEEDFIRNNRRINGGNDLPREFLSEIYRSICKNEIRITCEPGFVSPEMTSNQWISLMHKSTAPFIVSDSRAYLDYDMFVILSGPTIASISVVFDNAENKEVCQTCIDGFLAIAKISAYYQLENVLDDLVVCLCKFFTILDPLSVEESVLAFGDDTNARMATETVFTIASRYGDYIRTGWRNILDCILKLHKLGLLPTNIASDTASTSELSTENGHGPNSNSLSSTHRRSISTPKRSSGLFRRFSQLLSLGTEELISIPTEEQLFAHQQAVQTIHKCHIDNIFIESKFLQAESLMQLARALINAGAQRQKRNKISEDEDASVFCLELLIAITLNNRDRIGLLWKSVYENISNIVKSTVMPCALVEKAVFGLLRICHRLLPYKENITDELLRSLQLILKLDALVADAYYEKITQEVCRLVKENASHIRSHLGWCTVTSLLLITARHLEASEAGFDTLLFIMSDGAHLLPANYILCVDVARQFAESRVGLVDRSVVALDLMADSVNCLEKWTNDAKQAAKEEEVESMLQDIGEMWLRLVQGIRKVCLDQREEVRNHAVLSLQKCMTGAVGTHLPCDLSFQYFNQVIFTLLDDLLEISQTYPQKEYRNMEGTLIVALKLLFEVFLQLLQELSQSEAFCKLWVGVLSRVEKCVKMKGRGWRSEKFQELVPEHLKKTLLVMKSGGILVKSVGLGENSLWELTWLHVKNIAPSLQSEVFPEQGSEQLKLQHKQIETVGSLEPDANIYVPSNETVGQDGAGIG* 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0495 1471 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Lja6g0495 1471 Gene3D - 644 758 IPR023394 -
Lja6g0495 1471 SUPERFAMILY ARM repeat 352 1344 IPR016024 -
Lja6g0495 1471 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1460 - -
Lja6g0495 1471 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1460 - -
Lja6g0495 1471 Pfam Sec7 domain 568 751 IPR000904 GO:0005085|GO:0032012
Lja6g0495 1471 MobiDBLite consensus disorder prediction 921 950 - -
Lja6g0495 1471 SUPERFAMILY Sec7 domain 566 756 IPR035999 GO:0005085|GO:0032012
Lja6g0495 1471 CDD Sec7 568 751 IPR000904 GO:0005085|GO:0032012
Lja6g0495 1471 Gene3D - 561 643 - -
Lja6g0495 1471 ProSiteProfiles SEC7 domain profile. 560 749 IPR000904 GO:0005085|GO:0032012
Lja6g0495 1471 SMART sec7_5 564 751 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0495 Lja-Chr6 11970218 11977130 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0495 K18443 - gmx:100802024 2330.83