Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0491 ATGAGCACACGTAGTATGTTGGATATTGTTCTACACGATATACTTCGGGTGGTCACACCCTTACAAGAAGATTGGGCGATACGTTTTGCAATTATTAATGATTTCCGAAGCATTGTTGAATCTGTGGAAAGCCTGAGAGGAGCAACTGTTGAGCCATATGGATCATTTGTATCTAATCTCTTCACACGATGGGGTGACCTGGATATTTCAATTGAGTTATCAAATGGTTCACATATTTCATCTATTGGGAAAAATCAAAAACAGAGGTTATTGGGAGATCTTATAAAAGCTTTGAAACTGAAAGGTGGATGGATCAACTTGCAGTTCATCTCCCATGCGCGAGTTCCCATTTTAATATTCAAAAGCCGCCGACAGGGTGTATCTTGTGACATTTCAATCAATAACCTGCAGGGTGTGATCAAATCCAAGCTTTTGCTTTGGATTGACAGGATAGATGGCCGCTTTCGAGATATGGTTTTAGTGGTAAAGGAATGGGCCAAAGCACATAAAATCAATAACTCTAAAACTGGAACTTTCAACTCGTATTCTCTCAGTTTGCTAGTAATCTTTCACTTTCAGACATGTGTTCCTGCAATTTTGCCACCACTTAAAGATGTATATCCTGGCAATATGGTTGATAAACTGACAGGTGTTAGAGCTGATGCAGAGGATTTTATTGCGGAAACATGTAATGCTAACATAAACCGAATCATATCTGACAAATCCAGGCCAATTAACAGAAAATCTTTGCCTGAACTTTTTGTTGAATTCTTAAGAAAGTTTGCTCAAATGGATTCATGGGCCTCAGAGCTGGGAATTTGCCCATATACCGGACAATGGGAACAGATAAAGAACAACATGATATGGCTGCCCAAGACTTATGCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAGAATACTGCAAGATCTGTCAGTGCAGGACAACTGAGTAAGATATCCGAGGCATTTCTAAGGACATACAGCGTACTTACCTCCAAAAATCAGAATCAAAATTCTCTCTTGACTTTCTTAGCACCACCAGAGGTGTCAAGGTTAATTATAAAACCTGTTATCCCAAATTACAATGGTGGTGGTGGCTATTTCCACCCACCTCAGCTGCCACTACATGTGCAGAGAGCCGAGCACCCACGCCATCAACATCGGTCGCAGCGTCGTGTTCACAATGGAAGTCAAGGAACAACCAATGGCCAAAATATGGAGGCAAAAGATCCAATAGCCAAAACACAGAAGGGAAACTCCAACAGTTCAACTTCAAAAGTACCACCTGTGCAGGTACGTCAAGGCCAGCAGATATGGAGGCAAAAGATCCAATAG 1338 0.4126 MSTRSMLDIVLHDILRVVTPLQEDWAIRFAIINDFRSIVESVESLRGATVEPYGSFVSNLFTRWGDLDISIELSNGSHISSIGKNQKQRLLGDLIKALKLKGGWINLQFISHARVPILIFKSRRQGVSCDISINNLQGVIKSKLLLWIDRIDGRFRDMVLVVKEWAKAHKINNSKTGTFNSYSLSLLVIFHFQTCVPAILPPLKDVYPGNMVDKLTGVRADAEDFIAETCNANINRIISDKSRPINRKSLPELFVEFLRKFAQMDSWASELGICPYTGQWEQIKNNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLSKISEAFLRTYSVLTSKNQNQNSLLTFLAPPEVSRLIIKPVIPNYNGGGGYFHPPQLPLHVQRAEHPRHQHRSQRRVHNGSQGTTNGQNMEAKDPIAKTQKGNSNSSTSKVPPVQVRQGQQIWRQKIQ* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0491 445 PANTHER PROTEIN HESO1 1 424 - -
Lja6g0491 445 SUPERFAMILY Nucleotidyltransferase 7 147 IPR043519 -
Lja6g0491 445 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 424 - -
Lja6g0491 445 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 337 - -
Lja6g0491 445 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Lja6g0491 445 MobiDBLite consensus disorder prediction 380 445 - -
Lja6g0491 445 Gene3D - 152 328 - -
Lja6g0491 445 CDD NT_PAP_TUTase 27 148 - -
Lja6g0491 445 MobiDBLite consensus disorder prediction 394 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0491 Lja-Chr6 11683088 11689400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0491 - - ccaj:109788017 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0491 6 11683088 11689400 Lja6g0491 6 11683088 11689400 ECH