Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0490 ATGAAATCACCAATCAACATCGATTTTCTCCGATCAACCCTCGCCGTCAAGCTCGCCGCGTTCTTCCTCATCGCCGTCACTTTCTTCTACTTCGGGAAGCACTGGTCCGATTCCGATGGCTACAACCGCCAGCTCATCTTCTTCAACCAGGAACCCGACCCGGATCAGAATCTCAATCTTGTTGTCTCCACATCCCCGAATTTCAACAAAGTTTTCAATGTCTCTGAACTCGTTGATCTCAATCCACCGCTTCCGCCGCTGAAGAAAATCCAACCACCGTCGCCGCCGCCTCCTCCATCCCCTCCGCCACCTCCGCCGCCGGTCGAGAAATTCGGGATCGTGAAGGAGGATGGCACGATGTCAGAGGAGTTTGAAGTTGGGGATTTCGATCCGGAGATGGTGGATGATTGGGTGAACGAAACGCAGGTTGAGAGGGAGGGTTCTTCTGCTGCTCCCAAATTTGCCATCAAGAAATTCGGGTTGTGCCCGAAAACCATGAGTGAGTATATACCTTGTTTGGATAATGAAGACGCGATTCGGAAGCTGCCTTCCACGGAGAAAGGGGAGAGGTTTGAGCGGCATTGCCCAGAACAAGGTCGTGAGTTGAGTTGCTTGGTTCCTGCACCCAAAGGGTATCATGCTCCAATTCCATGGCCCAGAAGCAGAGATGAGGTATGGTTCTATAATGTTCCTCATACTCGTCTTGCTGAAGATAAAGGAGGCCAAAACTGGATTTACAAACAAAAGGATAAGTTTAAATTTCCAGGAGGGGGTACGCAATTTATACACGGGGCAAATGAATACTTGGACCATATATCTAAGATGATTCCTGAGATTACATTTGGTCAGCATATACGAGTTGTTCTTGATGTTGGCTGTGGTGTAGCTAGTTTTGGTGCTTACTTACTGTCACGGAATGTCGTTACTATGTCTGTAGCTCCGAAAGATGTTCATGAGAATCAGATCCAGTTTGCTCTTGAACGTGGTGTCCCAGCAATGGTGGCAGCATTTGCAACTAAACGTTTATTATATCCAAGTCAAGCTTTTGACTTGATACACTGTTCACGGTGTAGAATTAATTGGACTCGAGATGATGGGATATTGCTGCTTGAGGTTAATAGGATGCTAAGAGCAGGAGGGTACTTTGTCTGGGCTGCCCAGCCAGTGTACAAGCATGAGGAAGCTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACCACTCGACTCTGCTGGAAGTTTTTGAAAAAAGATGGGTACATTGCAATATGGCAGAAACCTTCTGACAATAGCTGCTATCTTAACCGTGAGGCCGGAACTAAACCACCACTGTGTGACCCAAGTGATGATCCAGACAATGTTTGGTATGTAAATCTACAAGCATGCATCTCTGAATTGCCTAAGAATGGATATGAAGCAAATGTTATTGCATGGCCTGCACGTTTGAAAACCCCACCTAATAGGATCCATAGCATAAAACATGATGCCCTCATATCCAGAGAAGAGCTTTTCAGGGCAGAGTCAATGTACTGGAATGATATAATAGCAAGCTACGTTCGTGCTTGGCACTGGAACAAGATGAGATTACGAAATGTTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCTTTGATTGATCTCAAGCTTAACAGCTGGGTTATGAATGTTGTTCCGGTTAGTGGCCCAAACACCTTGCCTGTTATATATGACCGTGGATTGATTGGAGTTATGCATGACTGGTGCGAACCGTTCGACACCTATCCGAGAACCTATGATTTATTGCATGCCGCAAACCTGCTTTCTGTTGAGAAGAAAAGATGCAATGTCTCATCAATTATGCTTGAGATGGATCGGATACTAAGACCTGGTGGAGTTGTATACATCCGTGATTCTCTTTCCATCATGGATGAACTTCAAGAGATTGCCAAAGCCATGGGTTGGCGCGTGTCATTGCGAGAGACATTTGAGGGGCCTCATGCAAGTGAAAGGATCTTGGTCTGTGATAAGCACCTGCTACATGCTTGA 2031 0.4604 MKSPINIDFLRSTLAVKLAAFFLIAVTFFYFGKHWSDSDGYNRQLIFFNQEPDPDQNLNLVVSTSPNFNKVFNVSELVDLNPPLPPLKKIQPPSPPPPPSPPPPPPPVEKFGIVKEDGTMSEEFEVGDFDPEMVDDWVNETQVEREGSSAAPKFAIKKFGLCPKTMSEYIPCLDNEDAIRKLPSTEKGERFERHCPEQGRELSCLVPAPKGYHAPIPWPRSRDEVWFYNVPHTRLAEDKGGQNWIYKQKDKFKFPGGGTQFIHGANEYLDHISKMIPEITFGQHIRVVLDVGCGVASFGAYLLSRNVVTMSVAPKDVHENQIQFALERGVPAMVAAFATKRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEALEEQWEEMLNLTTRLCWKFLKKDGYIAIWQKPSDNSCYLNREAGTKPPLCDPSDDPDNVWYVNLQACISELPKNGYEANVIAWPARLKTPPNRIHSIKHDALISREELFRAESMYWNDIIASYVRAWHWNKMRLRNVMDMRAGFGGFAAALIDLKLNSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEMDRILRPGGVVYIRDSLSIMDELQEIAKAMGWRVSLRETFEGPHASERILVCDKHLLHA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0490 676 MobiDBLite consensus disorder prediction 85 109 - -
Lja6g0490 676 Gene3D Vaccinia Virus protein VP39 265 430 IPR029063 -
Lja6g0490 676 CDD AdoMet_MTases 288 383 - -
Lja6g0490 676 PANTHER METHYLTRANSFERASE PMT12-RELATED 16 674 - -
Lja6g0490 676 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 192 406 IPR029063 -
Lja6g0490 676 MobiDBLite consensus disorder prediction 83 109 - -
Lja6g0490 676 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 510 657 IPR029063 -
Lja6g0490 676 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 16 674 IPR004159 GO:0008168
Lja6g0490 676 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 168 671 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0490 Lja-Chr6 11674627 11679534 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0490 - - gmx:100800414 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0490 6 11674627 11679534 Lja6g0490 6 11674627 11679534 ECH
Lja6g0490 6 11674627 11679534 Lja6g0490 6 11674627 11679534 PCT