Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0477 ATGGAGAACGCAGATCCTTGTAGAGATTTCATCAAAGACGTGAAGCGCATCATCATCAAGGTTGGCACTGCTGTAGTCACTGGTAAAGATGGAAGAGTTGCTGTTGGAAAATTAGGGGCACTCTGTGAGCAGATTAAGGAGCTGAATTCTCTGGGCTATGAGGTTATTTTGGTGTCTTCTGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATATAGGAAATTGATTAACAGCAGCTTTGCTGACCTTCAGAAGCCACAAGTTGAACTTGATGGCAAGGCTTGTGCTGCTGTTGGACAAAGCAGCCTTATGGCTCTTTATGATTCTTTGTTTAGTCAGCTAGATGTGACATCTGCTCAGCTTCTTGTGACAGACAATGATTTTAGAGACAGAGAGTTCAGGAAACAACTCAGTGAAACTGTGAAATCACTGCTAGCTCTAAAAGTTATTCCTATATTTAATGAGAATGATGCAGTCAGTACTAGGAAAGCTCCATATGAGGATTCTTCTGGCATATTTTGGGATAATGACAGTTTATCAGCTTTGTTGGCCTTAGAATTAAAAGCTGATCTTCTGATTTTGTTGAGTGATGTAGATGGTCTTTATAGTGGCCCTCCAAGTGACCCACATTCTAAGCTTATTCATACATACATTAAGGAACAGCATCAAAGTGAAATTACCTTTGGAGACAAGTCTAGGGTAGGAAGAGGGGGAATGACTGCCAAAGTAAAAGCTTCAGTTCATGCAGCTGACGCTGGCATTCCTGTTGTCATTACCAGTGGTTATGCAGCTGAAAATATAATGAAAGTCCTCCAAGGACAACGTATTGGAACCCTTTTCCACAGAGATGCGCATATGTGGGCCCCAGTAAAAGGGGTTGATGCTCGTGAGATGGCAGTAGCAGCTAGGGACTGTTCCAGACGGCTTCAGGCGTTATCTTCGGAAGACAGGAAACAAATTTTGCTAAAAATTGCTGATGCCCTGGAGGCACATCAAAAGGAGATCAGGGTTGAAAATGAAGCTGATGTTGCTGCTGCACAACAAGCAGGATATGAAAAATCCTTAGTTGCTAGGCTGGTTTTAAAGAATGAAAAGCTTGCAAGCATTGCCAACAACATACGAATTATTGCAAACATGGAAGATCCAATTGGTCGAGTATTAAAACGAACGGAGCTCGCAGAGGGGCTAATTTTGGAGAAAACATCAGCTCCTTTGGGAGTTCTCCTAATTGTGTTTGAGTCCCGCCCCGATGCACTAGTACAGATAGCTTCTTTGGCAATCCGAAGTGGCAATGGGCTTCTCTTGAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAAGTAATTACTGAAGCTATACCAGATACTGTTGGTTCAAAACTTATTGGACTTGTGACGTCAAGAGAAGAAATTCCTGAGCTACTTAAGCTGGATGATGTAATTGATCTGGTGATTCCAAGAGGAAGCAACAAACTTGTGTCTCAGATCAAGAGTTCCACTAAAATTCCTGTTCTGGGTCATGCTGATGGAATTTGTCATGTCTATGTTGATAAATCTGCGAATTTGGAGATGGCGAAGCAGATCGTGCTGGATGCAAAAATAGATTACCCAGCAGGCTGCAATGCCATGGAAACTCTTCTTGTTCATAAGGACTTAATAGAGAAAGGTTGGCTCAACAATATTATTGTTGACCTACGGATAGAAGGCGTTACATTATATGGAGGACCCAAGGCAAGTTCTCTGTTAAATATTCCACTGGCTGGTTCATTTCATCATGAGTACAGTTCGTTGGCTTGCACTGTTGAAATTGTGGATGATGATTATGCAGCTATTGATCATATAAATCAATATGGAAGTGCACACACGGATTCGATTGTCACAGAAGATCATGAAGTAGCGGATGTATTTCTACGCCGAGTAGACAGTGCTGCTGTTTTTCACAATGCGAGTACAAGATTCAGTGATGGGGCACGATTTGGACTAGGCGCGGAGGTCGGAATAAGTACAAGCAGGATTCATGCTCGGGGTCCAGTAGGAGTTGATGGATTATTAACAACCAGATGGATTCTCAAAGGAAGTGGACAGGTAGTAGATGGTGATAAAGCAGTTAGCTACACCCACAGAGACCTTGCTCTTAACTCTTCCTGA 2157 0.4274 MENADPCRDFIKDVKRIIIKVGTAVVTGKDGRVAVGKLGALCEQIKELNSLGYEVILVSSGAVGLGRQRLRYRKLINSSFADLQKPQVELDGKACAAVGQSSLMALYDSLFSQLDVTSAQLLVTDNDFRDREFRKQLSETVKSLLALKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLILLSDVDGLYSGPPSDPHSKLIHTYIKEQHQSEITFGDKSRVGRGGMTAKVKASVHAADAGIPVVITSGYAAENIMKVLQGQRIGTLFHRDAHMWAPVKGVDAREMAVAARDCSRRLQALSSEDRKQILLKIADALEAHQKEIRVENEADVAAAQQAGYEKSLVARLVLKNEKLASIANNIRIIANMEDPIGRVLKRTELAEGLILEKTSAPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPDTVGSKLIGLVTSREEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANLEMAKQIVLDAKIDYPAGCNAMETLLVHKDLIEKGWLNNIIVDLRIEGVTLYGGPKASSLLNIPLAGSFHHEYSSLACTVEIVDDDYAAIDHINQYGSAHTDSIVTEDHEVADVFLRRVDSAAVFHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVDGLLTTRWILKGSGQVVDGDKAVSYTHRDLALNSS* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0477 718 CDD ALDH_F18-19_ProA-GPR 296 696 IPR000965 GO:0004350|GO:0006561
Lja6g0477 718 PRINTS Glutamate 5-kinase family signature 52 66 IPR001057 GO:0005524|GO:0016301
Lja6g0477 718 PRINTS Glutamate 5-kinase family signature 96 124 IPR001057 GO:0005524|GO:0016301
Lja6g0477 718 PRINTS Glutamate 5-kinase family signature 234 254 IPR001057 GO:0005524|GO:0016301
Lja6g0477 718 PRINTS Glutamate 5-kinase family signature 136 157 IPR001057 GO:0005524|GO:0016301
Lja6g0477 718 PRINTS Glutamate 5-kinase family signature 175 202 IPR001057 GO:0005524|GO:0016301
Lja6g0477 718 Pfam Amino acid kinase family 15 260 IPR001048 -
Lja6g0477 718 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 8 715 IPR005766 GO:0003824|GO:0006561
Lja6g0477 718 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 304 698 IPR016162 GO:0016491
Lja6g0477 718 Hamap Glutamate 5-kinase [proB]. 15 291 IPR005715 GO:0005737|GO:0006561
Lja6g0477 718 Hamap Gamma-glutamyl phosphate reductase [proA]. 294 700 IPR000965 GO:0004350|GO:0006561
Lja6g0477 718 PIRSF P5C_synthetase 1 718 IPR005766 GO:0003824|GO:0006561
Lja6g0477 718 Pfam Aldehyde dehydrogenase family 294 558 IPR015590 GO:0016491
Lja6g0477 718 Gene3D - 5 288 IPR036393 -
Lja6g0477 718 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 302 689 IPR000965 GO:0004350|GO:0006561
Lja6g0477 718 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 512 658 IPR016163 GO:0016620
Lja6g0477 718 SUPERFAMILY ALDH-like 294 699 IPR016161 GO:0016491
Lja6g0477 718 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 607 628 IPR020593 GO:0004350|GO:0006561
Lja6g0477 718 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 3 716 - -
Lja6g0477 718 ProSitePatterns Glutamate 5-kinase signature. 232 249 IPR019797 GO:0004349|GO:0006561
Lja6g0477 718 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 3 716 - -
Lja6g0477 718 SUPERFAMILY Carbamate kinase-like 15 280 IPR036393 -
Lja6g0477 718 TIGRFAM proB: glutamate 5-kinase 15 284 IPR005715 GO:0005737|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0477 Lja-Chr6 11460436 11468427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0477 K12657 - gmx:548058 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0477 6 11460436 11468427 Lja6g0477 6 11460436 11468427 ECH
Lja6g0477 6 11460436 11468427 Lja6g0477 6 11460436 11468427 PCT