Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0469 ATGGCAATTTCTTCTTCCATCACGAGCGTGCACATCACGGCGCTAGACGCGATCGTGAACGTGAACTCCCTCTTCACCCTCGCCGTCTTCATCGGCCTAACCTGGAACCCTCACGACCCGGAGAACAACCTCAACTCCGACCCCGCCTGCGCCCCCACCGCCGCCATCGCCGAGAATCTCGTCGCCTTCCATGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCCTCATCGCACTCGCACTCAAGCAAGCCATCCGCCTCACCCGCACCTCCGCCTACACCCCCGCCGTCGCACATGTCAACCGCTCCTGCCTCCGCCTCGTCATGGTCGTCTCCGGCGCCGGATCTGTCTCCGGTTGCCTCTTCCTCATGCTCGCTCTTGTCAATGTTGTTCAGATCAAGCTTGGTACTCTCGCCTGCGGCAGCTCCCACGCTTTCGCCGCCATCGTTCCGCTCTTCATCTTCGTTCCGATTGCGCTTCTTATTTATGTTTCTGTAGTGTTTTACGCTTTTACCCGCTAG 522 0.5881 MAISSSITSVHITALDAIVNVNSLFTLAVFIGLTWNPHDPENNLNSDPACAPTAAIAENLVAFHVYSFSSFLFSSLIALALKQAIRLTRTSAYTPAVAHVNRSCLRLVMVVSGAGSVSGCLFLMLALVNVVQIKLGTLACGSSHAFAAIVPLFIFVPIALLIYVSVVFYAFTR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0469 173 PANTHER OS07G0240400 PROTEIN 4 173 - -
Lja6g0469 173 PANTHER MATERNAL EFFECT EMBRYO ARREST PROTEIN 4 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0469 Lja-Chr6 11253395 11253995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0469 - - var:108327597 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0469 6 11253395 11253995 Lja6g0469 6 11253395 11253995 ECH