Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0468 ATGGAAACTTTATCAAACAAGAGTGATGTTTCTCAAAAGAAAAGAGATGGGGTTCAGTCCTGTGTCACGGATTCCAGTGCAGATTCTAGAGGGACCAGTTTCAGTGGATCCAGTTCTTCAGCTTCTTCTGAAGAAGTAAAAGTGAAAGGGTCTTCCTCACCTGCTCCACTTGGCTGGCCTATTCTCAAGGCTTCAGTTTCCAAGCGCTTAAATTCTGATGACAAAGAAAATCAACATGAGTCCCACTTGGAAGACTCAAAATTTACCAGTATAGGTTTACAAATTTCAGATGTTGACATGATGAAGGAAAGGTTTGCAAAATTGTTGCTTGGGGAAGATATGTCAGGTTCTGGAAAAGGGGTTTGCACTGCTTTGGCCATTTCAAATGCCATTACTAATCTGTGTGCCACTGCATTTGGGCAATTATGGAGACTAGAACCTCTACCTTCTGAGAAGAAAGAAATGTGGCGGAGAGAGATGGAATGGCTTGTTAGTGTTAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCTGATGGAAGCAAGCTTGAGGTAATGACTTGCAGGCCTAGGAAAGATATTTTTATCAATCTCCCAGCTCTTCGCAAACTTGACAACATGCTTCTGGAAATTTTAGACAGCTTCACTGCTACAGAGTTTTGGTATGTTGATCAAGGCATTGTAGCCCAAGATGCAGATGGTTCGGCCTCTTTTCGCAAAACAATTCAGAGGCAAGAAGAGAAGTGGTGGCTTCCAGTACCCCGTGTCCCCCCTGCGGGTCTCAGCGAGGACTCAAGAAAGAAGCTGAATCACTCCAGAGAATGTGCAAACCAAATACTAAAAGCAGCCATGGCTATCAACAGCACTGCTTTGGCTGAGATGGAAGTTCCAGAGTCCTATTTGGAAGTCCTCCCTAAGAACGGAAGAACTTGCTTGGGGGATTTTATTTACCGTTACATCACATCAGATCAGTTCTCCCCAGAGTGCCTGCTCGATTGCTTGGACATCTCATCTGAACATGTTGCGCTAGAGATCGCGAACCGTGTGGAAGCAGCAATTTATGTATGGCGTAGAAGAGCTCACTCCAGGTCCTCTCCTAGTCCCAACCGTACAAGCACAAGGTCATCCTGGGAGATTGTCAAGGACTTCATGGTTGATGGAGATAAGAGAGAACTGCTAGCAGATAGAGCTGAAAACATTCTCCTTTCCTTGAAGCAGCGGTTCCCAGGCTTATCTCAAACTACCCTTGATACCAGCAAAATCCAGTGCAACAAGGATGTTGGAAAATCCATTTTGGAGAGCTACTCAAGAGTTTTGGAGAGCATGGCTTTTAACATCATAGCCCGCATTGATGATTTGCTCTATGTGGATGACCTGACCAAACATTCAGACAAATTTGCATTAGTTCCTAGTACAGTTAACATGGCTTCTCAGAAGAAGGTTTCATGTCCATCATTCTCAGTGTCTGTCTCGGACACTCCACGCAAATCAGCAGTTGGCACACCTCGCTTTTCACCCGCGCCGCTGATTAGTCCTGCAAGAGGGGAGAGAACTCCTTTCCTCAACAACAACAACAACATTATTAAACCTCATCGTCGCGGCTTTGGGGTGAGAAGAGTATTGTCAAATTATCTTGGAGGAGAGACAACAAAATCAAAGATTGGTAGCAATTCAATTGGGGTGAATGGTTCAAGCCCAAGTAGTAAAAAAACAGAACAACGTCTCAAGGAATTATCATGCCCCAAAAACAGAACAAAATGA 1770 0.4401 METLSNKSDVSQKKRDGVQSCVTDSSADSRGTSFSGSSSSASSEEVKVKGSSSPAPLGWPILKASVSKRLNSDDKENQHESHLEDSKFTSIGLQISDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPSEKKEMWRREMEWLVSVSDHIVELIPSWQTFPDGSKLEVMTCRPRKDIFINLPALRKLDNMLLEILDSFTATEFWYVDQGIVAQDADGSASFRKTIQRQEEKWWLPVPRVPPAGLSEDSRKKLNHSRECANQILKAAMAINSTALAEMEVPESYLEVLPKNGRTCLGDFIYRYITSDQFSPECLLDCLDISSEHVALEIANRVEAAIYVWRRRAHSRSSPSPNRTSTRSSWEIVKDFMVDGDKRELLADRAENILLSLKQRFPGLSQTTLDTSKIQCNKDVGKSILESYSRVLESMAFNIIARIDDLLYVDDLTKHSDKFALVPSTVNMASQKKVSCPSFSVSVSDTPRKSAVGTPRFSPAPLISPARGERTPFLNNNNNIIKPHRRGFGVRRVLSNYLGGETTKSKIGSNSIGVNGSSPSSKKTEQRLKELSCPKNRTK* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0468 589 MobiDBLite consensus disorder prediction 15 49 - -
Lja6g0468 589 MobiDBLite consensus disorder prediction 495 514 - -
Lja6g0468 589 Gene3D PRONE domain, subdomain 1 329 470 - -
Lja6g0468 589 Gene3D PRONE domain, subdomain 1 92 328 - -
Lja6g0468 589 ProSiteProfiles PRONE domain profile. 88 470 IPR005512 GO:0005085
Lja6g0468 589 MobiDBLite consensus disorder prediction 573 589 - -
Lja6g0468 589 MobiDBLite consensus disorder prediction 552 572 - -
Lja6g0468 589 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 18 561 IPR038937 GO:0005085
Lja6g0468 589 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 464 IPR005512 GO:0005085
Lja6g0468 589 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5 18 561 - -
Lja6g0468 589 MobiDBLite consensus disorder prediction 552 589 - -
Lja6g0468 589 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0468 Lja-Chr6 11246246 11251254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0468 - - gmx:100796692 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0468 6 11246246 11251254 Lja6g0468 6 11246246 11251254 ECH
Lja6g0468 6 11246246 11251254 Lja6g0468 6 11246246 11251254 PCT