Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0459 ATGGGAACAGGAGAAAATGATGATTCAAACAAGGTTTATGCCAAGAACCAGGACCATGTTGAAGTCCCAGATACCGCTCATCAAATCAGCAGCGATTCATGGTTGCAGGTGGCTTTTGTGCTCACCACCGGAGTCAACAGTGCTTATGTGCTTGGATATTCCGGCACCGTCATGGTTCCGCTGGGTTGGACCGGCGGCGTAGTTGGTCTGCTTCTTGCTTGTGGAATATCACTCTATGCAAATGTTCTTGTTGCCAGGCTCCATGAATATGGAGGGAAAAGGCACATTAGATACAGAGATCTTGCTGGTTTCATATATGGTAGGAAAGCATATTCTCTCACTTGGGCTCTGCAGTATATCAATCTTTTCATGATAAATACTGGCTTCATCATTTTGGCTGGTTCAGCCTTGAAAGCTACTTATGTTCTGTTTAGTGATGATGGGAAGATGACGCTTCCATATTGTATCATCGTAGCTGGAGTGGTGTGTGCGATGTTTGCCATTTGTATTCCACATCTTTCAGCTCTTGGAGTTTGGTTGGGAGTTTCAACACTCTTCAGCTTAGCATATATTGTGATAGCATTTGTGCTATCGCTTAATGATGGACTAAAATCACCACCTAGAGATTACAGCATTTCAGGAGATGGTGCAACTAAAGTGTTCACAACAATTGGAGCATCTGCAAATCTCGTTTTCGCATACAACACTGGCATGCTTCCTGAGATACAGGCAACAATCAGGGAGCCAGTTCATAAGAACATGATGAAAGCTCTTTACTTTCAGTTTACTGTTGGGGTTCTACCATTGTACCTGGTTGTCTTCACAGGCTACTGGGCCTTTGGATCTTCTACATCAGCCTATTTGTTGAATAATGTGTCTGGTCCTGTCTGGGTGAAAGCTGTGGCCAATATCACAGCCTTTCTTCAAGCAGTCATTGCATTGCATATATTTGCAAGTCCAATGTATGAGTACCTGGATACTAAATTTGGGATCAAAGGAAGTGCAATGAAGGTTAAGAACTTGTCATTTCGAATCACGGTGAGAGGTGGCTACCTGGCCTTCAATACATTTGTGTCGGCTCTCCTTCCATTCCTTGGAGACTTCATGAGCCTCACAGGGGCGATCAGCACATTCCCCCTTACATTTATCCTTGCAAACCACATGTATCTAGAGGCAAAGAAGGACAAACTAACAAACTTCCAAAAGCTCTGGCACTGGATCAACATTATTTTCTTTAGCCTCATGTCTGTTGCAGCAACAGTTTCAGCGTTGCGGCTGATTTCTGTAGACTCCAAAACATACCACATTTTTGCTGATTTGTGA 1323 0.4354 MGTGENDDSNKVYAKNQDHVEVPDTAHQISSDSWLQVAFVLTTGVNSAYVLGYSGTVMVPLGWTGGVVGLLLACGISLYANVLVARLHEYGGKRHIRYRDLAGFIYGRKAYSLTWALQYINLFMINTGFIILAGSALKATYVLFSDDGKMTLPYCIIVAGVVCAMFAICIPHLSALGVWLGVSTLFSLAYIVIAFVLSLNDGLKSPPRDYSISGDGATKVFTTIGASANLVFAYNTGMLPEIQATIREPVHKNMMKALYFQFTVGVLPLYLVVFTGYWAFGSSTSAYLLNNVSGPVWVKAVANITAFLQAVIALHIFASPMYEYLDTKFGIKGSAMKVKNLSFRITVRGGYLAFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLEAKKDKLTNFQKLWHWINIIFFSLMSVAATVSALRLISVDSKTYHIFADL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0459 440 PANTHER OS05G0424000 PROTEIN-RELATED 15 435 - -
Lja6g0459 440 Pfam Transmembrane amino acid transporter protein 32 424 IPR013057 -
Lja6g0459 440 PANTHER PROLINE TRANSPORTER 1 15 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0459 Lja-Chr6 11013895 11017260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0459 58 440 Organic Solute Cotransporters AT2G39890 73.629 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0459 - - gmx:100778997 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0459 6 11013895 11017260 Lja6g0459 6 11013895 11017260 ECH
Lja6g0459 6 11013895 11017260 Lja6g0459 6 11013895 11017260 PCT