Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0451 ATGTCGAGCACACCTGCAAAAGCCAGTTGGCCACCTGCGATCCATAAAGCATTTGTTGATGTATGCCTTCGAGAAATGATGAAGATGAATGAGCCGGGGACGCGAATTGCCAAGGTGAATTGGAGGAACATTGTTGGATCCTTTTACGCAAAGACTGGCGTGAGATATACCAAAAAACAAATTAAGAATCATTTTGATGCAACCAGAAAGATGTGGAAAGTTTGGGTGGAGTTGACTGGGGATAGTAGCATGAAATGGGATCCCGAAACCAAGAAGTTTGGCGCTACTGAGGAAGAATGGCGCAATTATATTCAGGAAAATCCAGTAGCTGCGCAATTTCAGTCTAAGGAAATCCAGTTTAAAGAAAAATTGGATATCATCTATGATGAGGGAATACGGCTTGAGGCAATTAAAAGTGGAACAAAACCTAAGTGGCTGAATGATGCTTTAGGTTCACCTCCTTTGCATGGAAAAGAGCGAGAGAAGAAACGTAAACGTGTTGTTAAGGAATGTGTTTCTGATGAGGACTGGGTTGATTCTAAGCCTTCAAAAGCCAATTGGACACCTGAAAATCATAAAATATTTATTGATTCATGCCTCGAAGAAGTATTCAAGGGGAATAAGTGCGGGACACATTTTACCAAAGAGGGCTGGAGGAATATTGGTGAATCCTTTTATGCAGAGACTGGTCTGAGATATGACAAAACACAAATTAAGAATCACTTTGATTCAACCAGAAAACAATGGAAAGTCTGGGTTAAGTTGATTGGTGATGATAGGATGAACTGGGACCCAGAAACCAAAACATTTGGTGCTTCTGAGGAAGAGTGGCTCAATTATATAAAGGAAATCCCAGAAGCTGCGCAATTTCAGTTTAAGGAAATGCCATTGTCTAACAAGTTGGATATCATCTTTGATACAAGTGTACAAACTGGGGAAATGGAAACTTCATCAGGGTCAGGGCTTAAGAGACATAATGATACTTCAGCTACATCTTCTTTGAGTGGAAAAGAGCGAGAAAAGAGACATAAGAATGTTGGTCTGGGTTTTGACTATAAGGGTGCCATTTTGGTTAATGCTACGCCAATAAGTACAATTGCAAGTGATCAAAGCATGTCTAGCTCATCATATCATAAGGTCAAAGCCTCATGGACCCCTTTAACGCACCAGATCTTTGTTGATATATGTCTGCAAGAGACATTAAAGGGGAATAAGCCCGGGACACATTTTACAAAGGAAGGTTGGAAAAATATCATGGAATCATTTTATTGGAAAACTGGTTTGAATTATGATAGATTACAACTTAAGAATCACTGGGATTCTATGAAGGATCAATGGAAAATTTGGTGTAAGCTAATTTGCACTAGTTACATGAAATGGGATCCATCTAACCATATGTTTGAGGCTAGTGATGAAGATTGGAAAAACTATTTGCAGGCAAACCCAGAAGCTGCCCAATTTCGCCATAAGGAACTGCAATTTGCTGACATGTTGGAAACCATCTTCAATGGAATCACTCTTACAGGGGAGACTGAACCTGCTGCGCAACCAAGGAAAAGTGATGATAGTGTTGTCACTTTCCCTTTGCATGCAAAAGAACCTGACACAGCCAGCTTAGATGTGAACACTAATTTTCTTTGTGATGCTGTTGCATCAAAAAGTATTCAAAAGAATGCTATTGGACTTTCATCCCCTGGAGGCAAGCGTAACTATAGCATTGGTGAATGTATTGAATGCCTTGATGGAATGGAGCAACTAGAGCAAGGAAGTGACCTCTACTTGTTTGCTTTAGATGTTTTCCTTAAGCAGGAATACAGGGAAATCTTTCTGCAACTGAAAACGCCTAATCTGAGGATCTCATGGTTGCAGCGGCTTCAGTCTGGTGCTCAACCTTCACTCTAG 1902 0.4043 MSSTPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTKKQIKNHFDATRKMWKVWVELTGDSSMKWDPETKKFGATEEEWRNYIQENPVAAQFQSKEIQFKEKLDIIYDEGIRLEAIKSGTKPKWLNDALGSPPLHGKEREKKRKRVVKECVSDEDWVDSKPSKANWTPENHKIFIDSCLEEVFKGNKCGTHFTKEGWRNIGESFYAETGLRYDKTQIKNHFDSTRKQWKVWVKLIGDDRMNWDPETKTFGASEEEWLNYIKEIPEAAQFQFKEMPLSNKLDIIFDTSVQTGEMETSSGSGLKRHNDTSATSSLSGKEREKRHKNVGLGFDYKGAILVNATPISTIASDQSMSSSSYHKVKASWTPLTHQIFVDICLQETLKGNKPGTHFTKEGWKNIMESFYWKTGLNYDRLQLKNHWDSMKDQWKIWCKLICTSYMKWDPSNHMFEASDEDWKNYLQANPEAAQFRHKELQFADMLETIFNGITLTGETEPAAQPRKSDDSVVTFPLHAKEPDTASLDVNTNFLCDAVASKSIQKNAIGLSSPGGKRNYSIGECIECLDGMEQLEQGSDLYLFALDVFLKQEYREIFLQLKTPNLRISWLQRLQSGAQPSL* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0451 633 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 2 141 IPR045026 -
Lja6g0451 633 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 169 335 IPR045026 -
Lja6g0451 633 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 335 544 IPR045026 -
Lja6g0451 633 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 552 632 IPR045026 -
Lja6g0451 633 MobiDBLite consensus disorder prediction 314 333 - -
Lja6g0451 633 MobiDBLite consensus disorder prediction 314 342 - -
Lja6g0451 633 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 2 141 - -
Lja6g0451 633 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 169 335 - -
Lja6g0451 633 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 335 544 - -
Lja6g0451 633 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 552 632 - -
Lja6g0451 633 Pfam Myb/SANT-like DNA-binding domain 186 280 IPR024752 -
Lja6g0451 633 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Lja6g0451 633 Pfam Myb/SANT-like DNA-binding domain 383 477 IPR024752 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0451 - - lja:Lj0g3v0011749.1 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0451 6 10898082 10901587 Lja6g0451 6 10898082 10901587 ECH