Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0449 ATGGCAGCTACAAGTTTCACACAATTTGTCTCGCACTCAACTTGTCTAACCCCTGATTCCAAGGGATTATCTTTAAGCTCCATGCCCTCAATACCGAAGAGCCAATCACGAGGAACATCATGGAAAAAATATCAACTGAAAGCTCTTGAAAAACTGAGACCCTCATCTTCAGTCGAAGAGTTCCTCACCAAGGCAACCCCAGATAAGGGGCTGATCAGGTTGTTGTTTTCCATGGGAGAAGCATTGAGAACAATTTCCTTCAAAGTCAAGACAGCTTCTTGTGGTGGAACACAATGTGTTAATTCTTTTGGGGATGAGCAGCTTGCAGTGGATATGCTTGCTGACAAGCTTCTTTTTGAGGCCTTAACTTACTCTCACTTCTGCAAGTATGCTTGCTCAGAAGAACATCCTGAGCTTCTGGACATGGGAGGCCCAACTGAAGGTGGATTTAGTGTTGCATTTGATCCCCTTGATGGCTCCAGCATTGTGGACACAAACTTCACAGTAGGCACCATCTTTGGTGTGTGGCCTGGAGATAAGTTGACTGGGGTTACAGGAAGAGACCAAGTTGCAGCAGCCATGGGGGTTTTGGGTCCTAGAACCACATATGTTCTTGCTCTTAAAGACTTCCCTGGCACCCATGAATTTCTTCTGCTCGATGAAGGAAAGTGGCAGCATGTCAAAGAGACTACAGAAATTAATGAAGGAAAACTATTCTCCCCAGGAAATTTGAGAGCCACATCTGACAACCCCAACTATGCCAAGTTGATTGATTACTATGTCAATGAAAAATACACATTGAGATACACTGGAGGAATGGTGCCAGATGTGAACCAGATTATTGTAAAAGAAAAGGGCATCTTCACAAACGTGTCATCGCCATCTGCCAAAGCAAAGCTGAGACTTCTGTTCGAGGTAGCTCCTTTGGGATTCTTGATTGAGAAAGCTGGAGGTTACAGCAGTGATGGTCATAAGTCTGTCCTAGACATAGTCATTGATAACATTGATGACAGAACTCAAGTTGCTTATGGATCCAAGAATGAGATCATTCGATTTGAAGAAACCCTGTATGGTTCATCCAGGCTCAAGGGTGCTGTACCTGTTGGAGCAGCTGCATAA 1119 0.4424 MAATSFTQFVSHSTCLTPDSKGLSLSSMPSIPKSQSRGTSWKKYQLKALEKLRPSSSVEEFLTKATPDKGLIRLLFSMGEALRTISFKVKTASCGGTQCVNSFGDEQLAVDMLADKLLFEALTYSHFCKYACSEEHPELLDMGGPTEGGFSVAFDPLDGSSIVDTNFTVGTIFGVWPGDKLTGVTGRDQVAAAMGVLGPRTTYVLALKDFPGTHEFLLLDEGKWQHVKETTEINEGKLFSPGNLRATSDNPNYAKLIDYYVNEKYTLRYTGGMVPDVNQIIVKEKGIFTNVSSPSAKAKLRLLFEVAPLGFLIEKAGGYSSDGHKSVLDIVIDNIDDRTQVAYGSKNEIIRFEETLYGSSRLKGAVPVGAAA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0449 372 PIRSF FBPtase_SBPase 36 362 IPR000146 GO:0005975|GO:0016791
Lja6g0449 372 Gene3D - 55 229 - -
Lja6g0449 372 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 58 359 IPR000146 GO:0005975|GO:0016791
Lja6g0449 372 MobiDBLite consensus disorder prediction 19 39 - -
Lja6g0449 372 Gene3D - 230 370 - -
Lja6g0449 372 ProSitePatterns Fructose-1-6-bisphosphatase active site. 298 310 IPR020548 GO:0005975|GO:0042578
Lja6g0449 372 CDD FBPase 60 356 IPR000146 GO:0005975|GO:0016791
Lja6g0449 372 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 56 358 IPR000146 GO:0005975|GO:0016791
Lja6g0449 372 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 69 229 IPR033391 -
Lja6g0449 372 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 235 355 IPR044015 -
Lja6g0449 372 SUPERFAMILY Carbohydrate phosphatase 49 355 - -
Lja6g0449 372 PANTHER SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLASTIC 58 359 - -
Lja6g0449 372 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 237 253 IPR023079 GO:0005975|GO:0016791
Lja6g0449 372 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 123 143 IPR023079 GO:0005975|GO:0016791
Lja6g0449 372 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 329 353 IPR023079 GO:0005975|GO:0016791
Lja6g0449 372 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 183 201 IPR023079 GO:0005975|GO:0016791
Lja6g0449 372 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 267 287 IPR023079 GO:0005975|GO:0016791
Lja6g0449 372 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 107 122 IPR023079 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0449 Lja-Chr6 10884539 10890389 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0449 K01100 - gmx:100786122 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0449 6 10884539 10890389 Lja6g0449 6 10884539 10890389 ECH