Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0448 ATGGCGGCGGCGGCGGCGACGGAGGACCGGAGCGCGAGGCGCAACCGCCTCGTCGACGAGGTCCTGGACTGCGTCATCCCTTACATCGACGACCCTAAGGACCGTGACGCCGTGTCTCAGGTGTGTAAGTGCTGGTACGAGCTTGACTCGTTGACTCGGAAGCATGTGACGATTGCGCTCTGCTACACCACCACGCCGGCGAGGCTTCGACGCCGGTTCCCGCACCTGGAGTCGCTGAAGCTGAAGGGGAAGCCTCGGGCGGCGATGTTCAACTTGATTCCGGAGGATTGGGGTGGTCACGTTACGCCTTGGGTGTTGGAGATCAATCAGTACTTTGATTGCCTCAAGAGTCTCCACTTTCGCCGGATGATCGTCAAGGATAACGATCTTCTCCTTCTTGCTCAATCGCGTGGTCCTGTGCTGCACAGTCTTAAGCTTGATAAGTGTTGTGGGTTTTCCACTGATGGCCTTTTACATGTTAGTCGCTTCTGCAGGAATTTAAGAGTACTACTTTTGGAGGAAAGCTCAATTGACGAGAAAGATGGTGAATGGCTACATGAGCTTGCTTTGAGCAATACAGTTCTTGAGTCTCTGAATTTTTACTTGACAGATGTTGCTGCTGTCAAAATTGAGGACCTTGAACTTTTAGCCAAAAATTGCCCGAACCTAGTTTCTGTGAAAATTACTGAATATGAAATTTCAAATCTTGTGAACTTCTTCCGGCAAGCATCTTCTCTGGAAGAATTTTGCGGAGGCATCTACAATGAGGAACCCGAAATATACTCTGCTGTATCATTACCAGCAAAGTTATGTCGATTGGGTTTAACATACATTGGAAAGAATGAGTTGCCGATGATGCTCATGTTCGCAGCTGCACTAACAAAATTGGATCTCCTCTATGCCTTGCTGGATACAGATGATCATTGCATGTTGATCCAGAAGTGCCCAAATTTAGAAGTCCTTGAGACAAGAAATGTAATTGGAGATAGAGGATTAGAAGTTCTCGGTAGCTGTTGTAAGAGGCTAAAAAGACTTAGGATTGAACGTGGTGATGATGAAGGAGAAACAGTTTCCCATAGAGGATTAATTGCTTTATCAGAGGGCTGTTCAGAGCTTGAATATTTGGCTGTTTACGTTTCTGATATCACCAATGCATCCCTGGAACACATGGGCACTCACTTGAGAAACCTCTGCGATTTCCGTCTCGTGTTACTCGACCAAGAAGAGAAAATAACAGATCTGCCACTCGACAGAGGAGTTCAAGCTTTGCTGAGGGGGTGTGACAAGCTTAAAAGATTCGCACTGTATCTGCGGCGAGGGGGGTTGACCGATGTAGGTCTCAGTTACATAGGGCAGTACAGCCAAAATGTGAGGTGGATGTTGTTGGGGGCTGTGGGGGAGACTGATGAAGGGCTTTTGGAGTTTGCGAAGGGATGCCCCAACCTTCAGAAACTTGAAATGAGAGGCTGTTCATTTTTCAGTGAGCATGCACTGGCTGTTGCTGCAACACAACTAACTTCTCTTAGGTACTTGTGGGTGCAAGGGTACGGTGCATCTCCTACCGGACGCGATCTTTTGGCAATGGCACGCCCCTTTTGGAACATTGAGTTAATTCCATCTAGAAGGGTGGTCGTTAATAACAACATGGATGGGCCTGTGGTTTCTGTTCATCATCCAGCTCATATTCTTGCATATTACTCTCTTGCAGGCCAAAGATCAGATTTTCCAGATACTGTTGTACCTTTGGACCCTGCAACATTTGTTGAACCCTAG 1773 0.4749 MAAAAATEDRSARRNRLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLAQSRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTVLESLNFYLTDVAAVKIEDLELLAKNCPNLVSVKITEYEISNLVNFFRQASSLEEFCGGIYNEEPEIYSAVSLPAKLCRLGLTYIGKNELPMMLMFAAALTKLDLLYALLDTDDHCMLIQKCPNLEVLETRNVIGDRGLEVLGSCCKRLKRLRIERGDDEGETVSHRGLIALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLLDQEEKITDLPLDRGVQALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLLEFAKGCPNLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFWNIELIPSRRVVVNNNMDGPVVSVHHPAHILAYYSLAGQRSDFPDTVVPLDPATFVEP* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0448 590 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 15 585 - -
Lja6g0448 590 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 15 585 - -
Lja6g0448 590 Pfam Transport inhibitor response 1 protein domain 74 120 IPR041101 -
Lja6g0448 590 Gene3D - 6 53 - -
Lja6g0448 590 Gene3D Ribonuclease Inhibitor 54 586 IPR032675 -
Lja6g0448 590 SUPERFAMILY RNI-like 274 523 - -
Lja6g0448 590 SMART LRR_CC_2 369 393 IPR006553 -
Lja6g0448 590 SMART LRR_CC_2 479 503 IPR006553 -
Lja6g0448 590 SMART LRR_CC_2 427 453 IPR006553 -
Lja6g0448 590 SUPERFAMILY RNI-like 92 347 - -
Lja6g0448 590 Pfam F-box 16 55 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0448 Lja-Chr6 10878587 10882281 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0448 K13463 - gmx:732662 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0448 6 10878587 10882281 Lja6g0448 6 10878587 10882281 ECH
Lja6g0448 6 10878587 10882281 Lja6g0448 6 10878587 10882281 PCT