Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0447 ATGACATCATCTCGTCCTCCTCCGTCGAAGTCGGTGGATCTCGACCTCACCATCGTCTCCGCCAAGCATCTCAAGAACGTCAACTGGAAAACCGGCGACCTCAAGCCGTACGTCGTCTTCTGGGTCGACCCCGACCGCCGTCTCGCCACCAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGAGCGTTTCACCCTCCCTCTCTCTCACCCCATCACTGACTCCTTTCTCACCCTCGAGATCTTCCACTCCAAACCCTCCGATACCCCCAAACCCCTCGTCGCCACCGTCCGCCTCCTCCTCGCCGACCTCCACGACCTCCATGATTCCTCCAGCATCCGCAAATTCACCCTCCTCCGCCCCTCCGGCCGCCCCCACGGCAAGATCCACCTCAAGCTCGGCCTCCTTGGTCGCCCCCAACCCCTCGATTACCCCAACCCAAGCTCCAACCCCAACCCTAACCCTAACCCTAACTGTAACCCTTCGTTCCTCTATTACAGAGGATATACTCCATCACCTTCCCAATCTCAACCACCTTCTCCTTACTCTTCTTCCTACACCTCTTACGCTGCTGATTCCTACACCGGCGGTTACTATCCCGGTTACTATTCAGGTGCTCCTCCACCGCCACCACCACCTAGGCCTTTCTTTGACCGACCGGGCGGTTATTCCGGGCTCAGCGGGCCATCTGCCCCGCTGGATTATTCCTCCGCCAGCTCCTATGATCCGAAGCCCAGGGGTGCAAAGATGGGCTTGGGTGCCGGGCTTGCTGTTGGCGCGGTTGCCGGGGCTCTGGGCGGGCTTGCTTTGGAAGAAGGGCTGAAATACGAAGAGGACAGGATCACGGAGAGGGTGGAAAACGGCGTTGCTGCTGCGCGGGACGATTACGGGGATTACCGGGCAGATTATTGA 918 0.5948 MTSSRPPPSKSVDLDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSPVWNERFTLPLSHPITDSFLTLEIFHSKPSDTPKPLVATVRLLLADLHDLHDSSSIRKFTLLRPSGRPHGKIHLKLGLLGRPQPLDYPNPSSNPNPNPNPNCNPSFLYYRGYTPSPSQSQPPSPYSSSYTSYAADSYTGGYYPGYYSGAPPPPPPPRPFFDRPGGYSGLSGPSAPLDYSSASSYDPKPRGAKMGLGAGLAVGAVAGALGGLALEEGLKYEEDRITERVENGVAAARDDYGDYRADY* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0447 305 Pfam C2 domain 13 106 IPR000008 -
Lja6g0447 305 PANTHER INGRESSION PROTEIN FIC1 8 301 - -
Lja6g0447 305 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 141 IPR035892 -
Lja6g0447 305 SMART C2_3c 13 115 IPR000008 -
Lja6g0447 305 Gene3D C2 domain 3 138 IPR035892 -
Lja6g0447 305 MobiDBLite consensus disorder prediction 207 246 - -
Lja6g0447 305 ProSiteProfiles C2 domain profile. 1 119 IPR000008 -
Lja6g0447 305 MobiDBLite consensus disorder prediction 161 188 - -
Lja6g0447 305 MobiDBLite consensus disorder prediction 138 188 - -
Lja6g0447 305 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 301 - -
Lja6g0447 305 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Lja6g0447 305 MobiDBLite consensus disorder prediction 146 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0447 Lja-Chr6 10828928 10830169 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0447 - - cam:101506439 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0447 6 10828928 10830169 Lja6g0447 6 10828928 10830169 ECH