Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0437 ATGGTTGATTTACATTGCAAATCAAAGGTGCTATCTCCCAACATGTCTTCCAAAACCCCCAAAATCTCTCTCACCTCCAACAACTCCACCTCCCTCCCATCCTTAAACCTACCCTTCCTCACCAACAGCGAAATCTCCGCCGCCGCGCCACCTCTCTGCGCCGCCTACGACCACTACCTCCGCCTCCCGGAGCTCCGAACCCTCTGGAACGCACGTGACTTCCCTAACTGGACCAACGAGCCAATCCTAAAACCCGCCCTACAAGCCCTCGAGATCACGTTCGGCCTCTTCTCCACAGTTCTCTCCGACCCCAGACCGTACGCGAACCGCAGGGAATGGAACCGTAGAGTAGAGTCCCTCGCCACGCGTCAGATCGAGATCATCTCGATCATCTGCGAAGACGAGGAGGAGAATCCAGATACACGCGGCACCGCGCCAACCGCTGATCTCACCACCAGCGAGACGAGTACCAGAAGCTACAGTGAAACCAGCCTCCTCCCTCGTCTCGCCACGTGGTACAGATCCAAGGACGCGGCGCAGAGGATCCTTCTCTCCGTGGAGTGCCAGATGAGGCGGTGTCCCTACACGCTAGGTTTGGGAGAACCGAACCTGGCCGCGAAACCGAGCCTGATGTACGACGCCGTTTGCAGACCGAACGAGGTTCACGAACTGAAAACGACGCCGTATGATGACCGAGTTGAGAATCAGGAGAATCTTACCTTACACGCGACGCACCAGATCGTGGAGTCGTGGATCCACGCGCTGCGGAAGGTTCTGGAGAGAGTAGCGGCGGCGATCGAGGGGAGAAGGTTTGACAAGGCGGCGGAGGATTGCTATACGGTGGAGCGGATCTGGAAGCTTATCGCGGAGGTGGAGGATGTTCATTTGATGATGGATCCTGGCGATTTTCTGAGGTTGAAGAATCAGTTGTCGGTTGGAGGCGAAACGGCGTCGTTTTGCTTCAGGTCGAGGGATCTGGTAGAGGTGACGAAGGTTTGCAGGGATTTGAGGCATAGTGTGCCGGAGATACTCGGCGTTGAGGTGGATCCGAAGGGCGGGCCGAGGATTCAGGAGGCGGCGATGAGGCTGTATGTGGCGGAGAAGGTGAGTGGGGCGGAGAAGCTTCATGTGTTGCAGGCGATGCAGGCGATTGAGGCGGCGATGAAGAGATTCTTTTTCGCGTATAAGCAGGTGCTTGCGGTGGTTATGGGGAGCTCGGAGGCGAATGGGAACCGAGTTGGGGTGAGTCGTGATGGGGGTGACTCGTTGACTCACTTGTTCCTTGAGCCCACGTATTTTCCTAGCTTGGATGCCGCCAAGACTTTTGTTGGATACTTTTGGGATAATGGTAACAAATGGGTGTGA 1365 0.5626 MVDLHCKSKVLSPNMSSKTPKISLTSNNSTSLPSLNLPFLTNSEISAAAPPLCAAYDHYLRLPELRTLWNARDFPNWTNEPILKPALQALEITFGLFSTVLSDPRPYANRREWNRRVESLATRQIEIISIICEDEEENPDTRGTAPTADLTTSETSTRSYSETSLLPRLATWYRSKDAAQRILLSVECQMRRCPYTLGLGEPNLAAKPSLMYDAVCRPNEVHELKTTPYDDRVENQENLTLHATHQIVESWIHALRKVLERVAAAIEGRRFDKAAEDCYTVERIWKLIAEVEDVHLMMDPGDFLRLKNQLSVGGETASFCFRSRDLVEVTKVCRDLRHSVPEILGVEVDPKGGPRIQEAAMRLYVAEKVSGAEKLHVLQAMQAIEAAMKRFFFAYKQVLAVVMGSSEANGNRVGVSRDGGDSLTHLFLEPTYFPSLDAAKTFVGYFWDNGNKWV* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0437 454 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 212 443 IPR037217 GO:0019441|GO:0020037|GO:0046872
Lja6g0437 454 MobiDBLite consensus disorder prediction 144 159 - -
Lja6g0437 454 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 451 IPR038759 -
Lja6g0437 454 Gene3D - 212 443 - -
Lja6g0437 454 Pfam Hs1pro-1 N-terminus 1 187 IPR009869 GO:0006952
Lja6g0437 454 MobiDBLite consensus disorder prediction 136 159 - -
Lja6g0437 454 Pfam Hs1pro-1 protein C-terminus 190 449 IPR009743 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0437 - - gmx:547603 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0437 6 10684266 10686479 Lja6g0437 6 10684266 10686479 ECH
Lja6g0437 6 10684266 10686479 Lja6g0437 6 10684266 10686479 PCT