LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja6g0424	ATGAGAATCACGGCGGACCCAACCCGCTCTCCAACTCCCAAAGAAGAAGTTGAGTGGGTCCCACTTCCCGACCACCCTGTCTTCACCGCCACCTCCCACGACGCTTCCTCCTCCTCCTCCTCCGCCACCGCCGCCGTTTCCCGAAACCTGCTTGCCTGGGACGGAGCCTCTCGCCTCTATTTCTGGGACACCGACGACAACTGCCTCCACCGCCTCACTCTCCGCCTCGGCGACCCCGATCCCACTTCCGTCCTCGCCGCTTCCCCTTCTAAGGTGTTGCAAGCGGATGTGGTGCCCGATTTCGATGTCCAGAAAATCTCTATCAACAGGAATGGAACAGCAATGCTGCTTTCTGGTTCTGAAAGACTCTGTGTTATGTACCTCTATGGACGCACGTCCAAACAGGATGTTAACTTAATTTGCAGGACTATTACTGTTGGTTCTCAAACATATTCGCCTGCGAACAATGATATTCGTGTATTACAAGCATTATGGCACCCTAGCAGTGATACTCATTTGGGAATCCTTTCTTCTGACTCAGTTTTCCGGCTTTTCAATCTGGCCGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTATGGAACCAGGCAGATCCAGCAGTGCCTCATCAGTGTGTCCAGTTGGTTTTTCTTTTGGGGGAGACCACTTATGGGATACGTTTAGTGTTTTTATTTCATTCAGTGATGGGGCGACCTATGTACTTTGCCCTGTTGTTCCATTTGGAAGTCTCTTCAAACGTGAGTCTTTATTAGAAATATACAATGACGCTCATACATTTGGGTTATCATCAGCCAACTCTGTAGCGGCTCGTAATTCAAAGATGGCAATTTCGTGGCTAGAAGCAACATTTCCTGAGTTAGAGAAACATGAAACTGAAGGAGACAACTTGTCTTTTCTAAGAGCTCAGGCTTATGCTTTATTTGATTCATCTCTTGTCTTGCAGGGACCCCTGCGAAGAGTAGGTCAGAGCGGAAATAAAGATTCAATTGGTCGTAGTGCAGAATGTGAAGGTCGTGCAGTTAGTTTTCTCTACAATTTAGTGAGCAGAGATTCTATTTTGGTGACTGCCTGGAGTGGTGGGCAATTACAGATAGATGCACTAGCCGATGAGATCCAACCTGCCTGGATTATTGGTAGTCCACCGCGTCTTCGTGCTGATTCCCATGACCAGATTCTTGGCCTTGCTATGATTTGTGAATCGATTCCTAGCGGCCGTCTGGATAAGGTTGATCATAATGCTTGGTTGGGTAATCCACCCCCTCTACTGAGATTGGCTATTGTTGATTTGGCTCTGCCAAGAAGAGCAGAAAGTGGTTATGATATTTCACTGTTCACTGATACCCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGACTCAATAGTATTGCATTTTCTTCCATTTACAAGTCAGACAAATGGCAAGGATGATACAATGAGAACACCTTCTGTGCATCCTGTTCTAAATACTTGCCAGAGTGGTTGCCCTTCAGAGCCTTCCCTTTATGGTTTTGTGTCATTGTCAGATTCATTTGGATATTCGTGGATTGTAGCTGCTACTCTTTCTCGAGAATGTGTTGTGCTTGAGATGAAAACATGGAATCTCTTGCTTCCAGTTAGCATTGATATGGAGAAAAAACCCTTTCAATTAGAGGGGCAACCAAAAGAGTCAGATATACCAACAATAATTAGCAAAGAACTACTAAGTGGGCCAAAGGAGGTACTTGTTCCTTGGGCCTCTCCAAGTTTGCGTTCTGTTGCGTCTGATTCAATAGAAGGCCGATCAAAATTACATCAGTATTTCAAGTTATTTCATGAAACTTATGTAGAGTATGCACATAAGGTGTACCTGGAGCTCAAGCATCACGCACCTCAGTTGAAAAAAATAATTAATGACCAACATTCTCGTTTGGGCGATGCACAGAAGAAGCTTTTGAAAGTCGAGGAGAAACAATCTGCATTACAGAAAAGGATAGATCGTGCAATTCAAATGCACAATTCCTTGGAAGAGCGCTTACAACAGTTGAGGAACTTACCGTGTGCTCTCAAAAAACCACTGTCCAGATCGGAGAGACAGTTCAAGTCTGAGCTTGACAACTTCAAGGAAGTTGAGTTGGGTGCTTTGCACTCCTCTGTTGATGCGCTAAGTGCAAGGATGAGAAGGCACGTGCAAGCTTCTAAAGCTAGTCAACAACAGAAAATATCAGGGAAGAGTGCTGGAGATGACCAGATATCCATGCTCAAATCATCGCTTGAAAAACTTACACTTGTAAATACGGAAAATACAAAGAAAGTTAAGCTTGTTGAGTCCTCATTGAAAACCAAAGAAAGAAGCAGCAGAGAATCTAGCCTTCCTCTGCTTGAAAACTGA	2409	0.4467	MRITADPTRSPTPKEEVEWVPLPDHPVFTATSHDASSSSSSATAAVSRNLLAWDGASRLYFWDTDDNCLHRLTLRLGDPDPTSVLAASPSKVLQADVVPDFDVQKISINRNGTAMLLSGSERLCVMYLYGRTSKQDVNLICRTITVGSQTYSPANNDIRVLQALWHPSSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPMEPGRSSSASSVCPVGFSFGGDHLWDTFSVFISFSDGATYVLCPVVPFGSLFKRESLLEIYNDAHTFGLSSANSVAARNSKMAISWLEATFPELEKHETEGDNLSFLRAQAYALFDSSLVLQGPLRRVGQSGNKDSIGRSAECEGRAVSFLYNLVSRDSILVTAWSGGQLQIDALADEIQPAWIIGSPPRLRADSHDQILGLAMICESIPSGRLDKVDHNAWLGNPPPLLRLAIVDLALPRRAESGYDISLFTDTLMPERIYSLHDGGIDSIVLHFLPFTSQTNGKDDTMRTPSVHPVLNTCQSGCPSEPSLYGFVSLSDSFGYSWIVAATLSRECVVLEMKTWNLLLPVSIDMEKKPFQLEGQPKESDIPTIISKELLSGPKEVLVPWASPSLRSVASDSIEGRSKLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQHSRLGDAQKKLLKVEEKQSALQKRIDRAIQMHNSLEERLQQLRNLPCALKKPLSRSERQFKSELDNFKEVELGALHSSVDALSARMRRHVQASKASQQQKISGKSAGDDQISMLKSSLEKLTLVNTENTKKVKLVESSLKTKERSSRESSLPLLEN*	803

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja6g0424	802	MobiDBLite	consensus disorder prediction	780	796	-	-
	Lja6g0424	802	MobiDBLite	consensus disorder prediction	736	755	-	-
	Lja6g0424	802	Pfam	Nuclear pore component	450	782	IPR019321	-
	Lja6g0424	802	Pfam	Nuclear pore component	22	212	IPR019321	-
	Lja6g0424	802	PANTHER	NUCLEOPORIN NUP84-RELATED	9	790	IPR037700	GO:0000055\|GO:0000056\|GO:0006913\|GO:0017056
	Lja6g0424	802	Coils	Coil	650	691	-	-
	Lja6g0424	802	MobiDBLite	consensus disorder prediction	780	802	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja6g0424	K14318		-	gmx:100801853	1286.94

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja6g0424	6	10326021	10334563	Lja6g0424	6	10326021	10334563	ECH