Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0420 ATGGGCTCGTTATGGCGCGCGGGTACCAAGCTCTCCCTTGTTCTCTCAGCCGTGGGCGGTGGATCCGCGGCGGCGTTGATTGCCACCTCCGACGACCCCGAAACAGCGCTCAAGCTTTGTGCCACCGTTCCCCGTCGCCTCCTCCGCGACGCCGTCACCGCCGCCAACATTGCCTTCGATTATGAATATTCGCTGTGGGGACTCGCGGAAGGAAGTAGTGAGAGGGAGAGAACCAAGCATGAAGTTCACCTTCGCTCCGCAAAAAAACTGCGAGACCTGTGTTTTACGAATGGAGGGATTTATATAAAGCTTGGACAACATCTTGGGCAGTTGGAGTACTTAGTTCCTCTAGAATATGTTCAGACAATGAGGGAGTCTATGCTTAATAGATGTCCAGTTTCTTCATATGAGCAAGTATGTGATGTCTTCAAGAAAGAGCTCGGAGACTCACCAGATAATGTATTTTCTGAGTTTGATCCAGTCCCAATAGCAAGTGCTTCCCTTGCACAAGTTCATGTAGCCCGCACACATGATGGCCAAAAAGTTGCAGTCAAGGTTCAACATACTCACCTGACTGATACTGCGGCTGCTGATCATGCCACTGTGGAATTGATTGTGAACACTCTGCATAGGTTCTTTCCCAGTTTTGATTATAGGTGGTTGATTGATGAGATTAACGAGAGTTTGCCCAAGGAATTGGATTTTTTAACTGAGGCTAAGAACAGTGAGAGGTGCTTGGAGAACTTTCGCAAGTTTTCCCCTCATATTGCAAATTATGTATATGCACCCAAAGTATATTGGACTTTGAGTACCTCAAAGCTGCTAACGATGGAATTTATGGACGGTGCTTATATAAATGATGTTAAGAGCATAAAAAAACTTGGGATCCATCCGCATGAACTTTCAACACTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTGCATTGTGATCCACATGCTGCGAACTTATTAGTTCGCCCATTGCCTTCTAGCAGAGCTGGTATTCTAGGCTGGAGAAAACCACAGTTGATTCTTTTAGACCATGGACTCTATAAAGAGCTTGACTTCAATATGAGAACTAATTATGCTGCACTATGGAAAGCATTGATATTTGCTGATGCTAATGCAATCAAGAAATACAGTGCAAAACTGGGTGCTGGGGAGGACTTATATGCACTTTTTGCTGGAATTCTAACAATGAGACCATGGAATAGAGTCATCGATCCATCCATGGACCATTTAGTCATACAGGGAAATGAGAGTGATCGATCAGAACTGCAGATGTATGCTTCGCAATATTTCAATGAAATCTCAGAGCTTCTAAGAAGATTACCACGTGTGATTCTTCTCATGCTGAAGACAAATGACTGTTTACGATCCGTCAACAATATTCTGTTACAGGGATCGTCTCTGGAGACATTTTTTGTCATTGGAAAGGTTTCTTCTGAGGCTGTCATTGAGGCAAAGATGGCACAAAGCAAGTCACTTGTAACCTGGTTTAGTGTTCGATTGGATAAGATTTTGATGGAAATTCGACTTTGGGGAATGCAGATGGCATGGTGGCTTCTGCAACTACGAATGACGTTGTCTTGGTCTAACCAGGCATCATGA 1626 0.4416 MGSLWRAGTKLSLVLSAVGGGSAAALIATSDDPETALKLCATVPRRLLRDAVTAANIAFDYEYSLWGLAEGSSERERTKHEVHLRSAKKLRDLCFTNGGIYIKLGQHLGQLEYLVPLEYVQTMRESMLNRCPVSSYEQVCDVFKKELGDSPDNVFSEFDPVPIASASLAQVHVARTHDGQKVAVKVQHTHLTDTAAADHATVELIVNTLHRFFPSFDYRWLIDEINESLPKELDFLTEAKNSERCLENFRKFSPHIANYVYAPKVYWTLSTSKLLTMEFMDGAYINDVKSIKKLGIHPHELSTLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSRAGILGWRKPQLILLDHGLYKELDFNMRTNYAALWKALIFADANAIKKYSAKLGAGEDLYALFAGILTMRPWNRVIDPSMDHLVIQGNESDRSELQMYASQYFNEISELLRRLPRVILLMLKTNDCLRSVNNILLQGSSLETFFVIGKVSSEAVIEAKMAQSKSLVTWFSVRLDKILMEIRLWGMQMAWWLLQLRMTLSWSNQAS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0420 541 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Lja6g0420 541 PANTHER ABC1 FAMILY PROTEIN 7 531 - -
Lja6g0420 541 SUPERFAMILY Protein kinase-like (PK-like) 129 331 IPR011009 -
Lja6g0420 541 PANTHER BNAC04G05270D PROTEIN 7 531 - -
Lja6g0420 541 CDD ADCK1-like 126 390 IPR045307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0420 Lja-Chr6 10159891 10171972 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0420 K08869 - gmx:100796182 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0420 6 10159891 10171972 Lja6g0420 6 10159891 10171972 ECH