Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0392 ATGCTTTCAGGTTCAACTGCTGTGAGTCACTTGCAATTTAGAGCTACAAATTCCCACAAAAGACCAACTCTAGGTTTGAGAGGAGAGACGTTTCAATTTTCTAGCGTAAGGTTCTGTCTAAAGTATAAAGTTTCCTGCAAACTTACTGAGTTGGGAAGTGATTCATGCTTGTCAAAGGAACTTGAAAAGAGTAAACCTTTGGTTAAGATGTGCGGCATTACATCAGCTAAAGACGCTGCTATGGCGGCCGAAGCTGGTGCAAACTTTATTGGAATGATTATGTGGCCAAACTCAAAACGTTCTGTTTCACTTTCTGTTGCAAAGGAGATATCAAAAGTTTCAAGAGATTATGGAGCGGAACCTGTGGGAGTATTTGTGGATGATGACACAGAAACGATATTAAGAGCTTCTGATGCCTCAAACCTTGAATATGTGCAGCTTCATGGATCTGGTTCTCGGATAGCTTTCCCGTCTTTAATTCAGGAAAATAGGGTAATATATGTTCTCCATGCAAATGAGGATGGGAGCCTTTTAAACACAATTTCTGATGAAGAGTGCTCTCAAGTTGATTGGGTTCTTGTAGATAGTGCAAAGGGTGGCAGTGGCAAAGCGTTCAATTGGGCGCAGTTTAAACTACCAAAAATTAGAAGTAAGCAAGGTTGGCTCTTAGCAGGAGGGATCAATCCAGAGAATGTTTCTGAGGCTATATCTACTCTCAAACCTGAAGGGGTGGATGTCAGTAGTGGCATTTGTGCATCAGATGGAATCCAAAAGGATCCAGCAAGAATAGCTTCCTTCATCAATGCAGTGCGTTCTGTTCAGTATTGA 828 0.4155 MLSGSTAVSHLQFRATNSHKRPTLGLRGETFQFSSVRFCLKYKVSCKLTELGSDSCLSKELEKSKPLVKMCGITSAKDAAMAAEAGANFIGMIMWPNSKRSVSLSVAKEISKVSRDYGAEPVGVFVDDDTETILRASDASNLEYVQLHGSGSRIAFPSLIQENRVIYVLHANEDGSLLNTISDEECSQVDWVLVDSAKGGSGKAFNWAQFKLPKIRSKQGWLLAGGINPENVSEAISTLKPEGVDVSSGICASDGIQKDPARIASFINAVRSVQY* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0392 275 Pfam N-(5'phosphoribosyl)anthranilate (PRA) isomerase 68 268 IPR001240 GO:0004640|GO:0006568
Lja6g0392 275 SUPERFAMILY Ribulose-phoshate binding barrel 67 272 IPR011060 -
Lja6g0392 275 Hamap N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 66 273 IPR001240 GO:0004640|GO:0006568
Lja6g0392 275 PANTHER N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE 19 275 IPR044643 GO:0000162|GO:0004640
Lja6g0392 275 CDD PRAI 68 270 IPR001240 GO:0004640|GO:0006568
Lja6g0392 275 Gene3D Aldolase class I 64 274 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0392 Lja-Chr6 9767372 9769794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0392 K01817 - gmx:100812873 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0392 6 9767372 9769794 Lja6g0392 6 9767372 9769794 ECH