Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0375 ATGATTCACTCCTCCACCTCCTCCCTCCTCCGCCATAACAACCACCGCTTCCTCTTCTCCTTCCGCTCCAAACCTTCTAATTCTGACTCACACTCTAACTCACACTCACAGCAATCTCTCTCATTTGGAAACTCGCTATTATCTCTCACACCTTCTTCTGCGCGGTCATCATGCTGCCACGTGGCGCGCGTCTCCACGGAGGCATTGGAGCTCTCGTCGACTCCGCCGCCGCCGGGCTTCGACCTCCGCCGCGAGATTGCGAGGCTCACCGCGCTCCGGGAGAAGCTCGCCGGCTGCGGTACCACCGAGGAGAAGCTCCGGGCGGTGAACTCCGATTCCAGGGTGAGGAGATTCTTCAGCTCCCACCGCGGGCTCGTGAGGGTTTTGGCGCTCGGGTCTGAGGAGTTGTTCTTGCTCAAGTGCTTGGTTGCCGCCGGGCAGGAGCACGTGCTGTGCTTGGGTGACGGTGGACAGCTGGAGTCTTCGCCGGCGGCGGCGGCGAGTGAGGGGTCTGTGAAGAGCGCGTTCTACGCTCTGGCGGAGATGATTGAGAAACTGGATTCGCGTAACGGCAATGGCGGTGTGGGGTTTGGGAACATGGGGATGGCTTTGGAGGATCATGAAATTCGTGACCTGAACAAGTTGTTAGAGACTTTGGCGCAAATTGAACGCTTCTATGACTGCATTGGGGGAATTATAGGATATCAGATAACAGTACTGGAAATTATTGCCCAAAAATTGTTTGAGAGGCAGAATATAAACTGGGCTCAGCACATGCATGAAGTGAAAGAATGCCAAATTTTGGGAATCGATGCACCTAAAGGGCATGACCTTTCTGAAAATACAGAATATGCATCTCAAGCAGCTCTATGGGGTATAGAGGGTTTGCCAGACCTAGGTGAAATTTATCCTTTGGGAGGCGCTGCAGACAGGCTTGGTTTAGTTGATCCTGACACTGGTGAATGCCTGCCCGCTGCGATGCTACCCTATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTGCAGGCTAGAGAGTTCTTGTACTTCAAGTTATTTGGGAAACAATGTATCACCCCTGTTGCTATAATGACAAGTTCTGCAAAGAACAACCACAAACACGTCACTTCTCTATGTGAAAGACTTTCATGGTTTGGAAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTGCCAGTTGTAGGTGCAGAAGATGGGCAGTGGTTGGTCACGGAACCATTCAGTCCCTTGACCAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCTCACGACAAAGGCATCTTCAAATGGTTTTATGGACATGGAAGAAAAGGAGCAACTGTGCGCCAAGTCAGTAATGTTGTGGCAGCTACAGATTTAACCCTCTTGGCCTTAGCAGGGATTGGATTACGTCAAGGAAAGAAACTGGGGTTTGCTTCCTGTAAGCGTAGCTCAGGAGCCACAGAAGGAATTAATGTCCTGATGGAGAAGAAAAGTCTTGATGGTAACTGGGAATATGGTGTTTCTTGCATTGAATACACAGAGTTTGAGAAGTATGGGATTACGAATGGAACTCTTGCTCCGTTAAGTATGCAGGCAGAGTTTCCAGCGAATACAAACATCTTATATGTTGATTTACCTTCTGCGGAGCTAGTTGGATCAAGTAAGAGTGACAATAGTTTACCTGGAATGGTGCTAAATACAAGAAAGACAATAGATTATGTAGACCAGTTTGGAAGACACTGTAGGATCTCTGGTGGAAGACTAGAGTGCACCATGCAAAATATAGCAGACAATTATTTCAACTCATATTCATCTAGGTGTTATAATGGCGTGGAAGATAAGCTAGATACATTTATTGTATATAATGAACGAAGAAGAGTTACCTCATCTGCTAAGAAAAAAAGAAGACATGGAGACAAGTCCTTACACCAGACACCTGAGGGCTCACTATTGGATATCTTAAGAAATGCGCATGATCTGCTTTCAGGATGTGAGATAAGACTTCCTGAGATTGAAGCTAATGAGAACTATGTTGATTCGGGACCACCATTTCTCATCCTTCTTCATCCTGCTCTTGGTCCCCTTTGGGAAGTCACCAGACAAAAATTTTATGGAGGTTCAATATCGAAGGGCTCTGAGTTACAGATAGAGGTTGCGGAGTTCTTTTGGAGGAATGTTCAGCTTGATGGAAGTCTGCTCATATTAGCTGAAAATGTTATGGGTTCAATGAGGATTAGTGAGAGTGGTGAATCTATACTACATTATGGTCAAAGGTGTGGAAGATGTAAATTGCAGAATGTCAAGGTGTTGAACAAAGGAATTGATTGGAGTTATGGTGGAAACGTGTACTGGAAAAATGATGTGCAGCGGTCTGAGGTATTGCAGATCATACTGCATGGAAATGCAGAATTTGAGGCTACTGATGTTACCTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCCACAAACTGAAGATCACGCCGGGAAGCCCAGGTCTCTTCATCCTTAGAAATTTGATTGGCTTCGTTGTTTTAATCACTAAAGTAATATATATTAGTGTTATTTATGGAATGGTCTTGAAATACTTAGTGAAATTGCTTATTTTCTATCTAGTCGTAGAATAA 2643 0.4578 MIHSSTSSLLRHNNHRFLFSFRSKPSNSDSHSNSHSQQSLSFGNSLLSLTPSSARSSCCHVARVSTEALELSSTPPPPGFDLRREIARLTALREKLAGCGTTEEKLRAVNSDSRVRRFFSSHRGLVRVLALGSEELFLLKCLVAAGQEHVLCLGDGGQLESSPAAAASEGSVKSAFYALAEMIEKLDSRNGNGGVGFGNMGMALEDHEIRDLNKLLETLAQIERFYDCIGGIIGYQITVLEIIAQKLFERQNINWAQHMHEVKECQILGIDAPKGHDLSENTEYASQAALWGIEGLPDLGEIYPLGGAADRLGLVDPDTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLFGKQCITPVAIMTSSAKNNHKHVTSLCERLSWFGRGRSTFQLFEQPLVPVVGAEDGQWLVTEPFSPLTKPGGHGVIWKLAHDKGIFKWFYGHGRKGATVRQVSNVVAATDLTLLALAGIGLRQGKKLGFASCKRSSGATEGINVLMEKKSLDGNWEYGVSCIEYTEFEKYGITNGTLAPLSMQAEFPANTNILYVDLPSAELVGSSKSDNSLPGMVLNTRKTIDYVDQFGRHCRISGGRLECTMQNIADNYFNSYSSRCYNGVEDKLDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPEGSLLDILRNAHDLLSGCEIRLPEIEANENYVDSGPPFLILLHPALGPLWEVTRQKFYGGSISKGSELQIEVAEFFWRNVQLDGSLLILAENVMGSMRISESGESILHYGQRCGRCKLQNVKVLNKGIDWSYGGNVYWKNDVQRSEVLQIILHGNAEFEATDVTLQGNHVFEVPDGHKLKITPGSPGLFILRNLIGFVVLITKVIYISVIYGMVLKYLVKLLIFYLVVE* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0375 880 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 14 850 IPR039741 -
Lja6g0375 880 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 202 660 IPR029044 -
Lja6g0375 880 PANTHER UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 3, CHLOROPLASTIC 14 850 - -
Lja6g0375 880 SUPERFAMILY Nucleotide-diphospho-sugar transferases 136 744 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0375 K22920 - gmx:100788781 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0375 6 9464127 9472719 Lja6g0375 6 9464127 9472719 ECH