Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0369 ATGGCGAACTTCGAAGAACTCTTATCCTCCTTGAACTCAGACATCAACTCCTACACCGGCAAAGACCCTCTTCTTCCTTGGCTCCGAGGGATCCGAAAGATGAAGGACACTCTTCCTCCTCAAACCCTCAACGAAAAACTCCCCGATTTCCTCCAGAAATGTGCTCGCATCTTCGAGCTCGATCGGCGTTACAGAAACGACATGCGTTATCTTCGCGTTTGGCTCCACTTGATGGATTTTGTGGATGATCCTGGAGCACTTTTGAAAACCATGGAGGTGAATCATATTGGGACGAAACGGTGTCAGTTCTACCAAGCATATGCTCTTTACCATGAGAAGAGCAAGAGGTATGATGAGGCAGAGAAAATGTACCATCTGGGAGTGAAGAATCTTGCAGAGCCTTTAGATGAATTGCAGAAATCATATGATCAATTTCTTCAACGCATGAAGCGGAAGAACAACAAGAGAGTCCAGCACAAGGAAGTAAGGTCTAGCAGGAGGCCTCTGTCTACAAAGGGCATACCTCCTTTTGATAACAAGACTGGGGAATGCAGTGTTGGGGGTGCGCAAACAGGACGCCAAGTTGCGAGTTCTGTAATTGAAGATGTTGCTGATGATAGAAGAGTGAAGACTAGAAAGAGTGAGGGCAAGAGATTTCATGGTGATGATACAGTTGTTGTCAAGAAGTTTGTTGGCACTGCCATGGATGGAAAGTCTGAAGTAGAAGATGCATGCCATCATGGACTGGTGGATCCTACAATAAATATGAAGGAGGCCAGGAATGCTATTAACAGCATGTTCCGGGAGCCATTGGAGACTGTTCCATTAGCCAGGAAATCACATAAAAAACATGCGAAAGAAAGTCGGAGTACAAAGAATGACTTCAAAGTTTTTGTTGATGAAAACATGGATTATGGAATCAAACCATCCGGTTCTTTATCACTTCAGCAAAGGACTGGAGCTAGCCAAGCTCACCAAGAACCTCTCCAGATATACATTGATGATGAAGGATGTTCTGAGAACAATGACGTAAATATGAGTTTGTCTGATGGTTCTGCTTCATCAGCTTCAAAACTAAATGGCTTTGTTTTCCCACCACCTAAGGATCTTCTTTCTGAAAAATCTTCTGATATGGAGGCAGTTAGCTCCCGTAATCCAAGGTTATTTAGAGAGGATACAATCGTTGGCAGATTTGTTGGTTCCGCCATTTTGGATGAACCAAAGGTGGAAAATGTTTGCCACCACGGCTTAGTAGAGCCCACAATCAACATGAAGGAAGCTATGAATGACATAAATGGCATGTTTGTGAAACCAATGGATTTTGTTAGGAGAAAAAGATCAATGAAGCAGGAGAAAGGACCCGAGAGCCATAGTGGAAAGGAATTTGGTGGGTTTTCAATCCTTGCTGATGATGACCTAGAACATCGACAAGGTCCATCACCACCACCTCCACCTCCACCAAAGTTGCCAAGAATGTCAAAGGAATCTGATTTATTTGAGCCAACTCTCCACACAAAGGAAGCCAAGGACGACATAAACAAGATGTTTAGTATGCCACTCGATTTTTAG 1569 0.4366 MANFEELLSSLNSDINSYTGKDPLLPWLRGIRKMKDTLPPQTLNEKLPDFLQKCARIFELDRRYRNDMRYLRVWLHLMDFVDDPGALLKTMEVNHIGTKRCQFYQAYALYHEKSKRYDEAEKMYHLGVKNLAEPLDELQKSYDQFLQRMKRKNNKRVQHKEVRSSRRPLSTKGIPPFDNKTGECSVGGAQTGRQVASSVIEDVADDRRVKTRKSEGKRFHGDDTVVVKKFVGTAMDGKSEVEDACHHGLVDPTINMKEARNAINSMFREPLETVPLARKSHKKHAKESRSTKNDFKVFVDENMDYGIKPSGSLSLQQRTGASQAHQEPLQIYIDDEGCSENNDVNMSLSDGSASSASKLNGFVFPPPKDLLSEKSSDMEAVSSRNPRLFREDTIVGRFVGSAILDEPKVENVCHHGLVEPTINMKEAMNDINGMFVKPMDFVRRKRSMKQEKGPESHSGKEFGGFSILADDDLEHRQGPSPPPPPPPKLPRMSKESDLFEPTLHTKEAKDDINKMFSMPLDF* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0369 522 PANTHER OS11G0128700 PROTEIN 5 522 - -
Lja6g0369 522 MobiDBLite consensus disorder prediction 445 522 - -
Lja6g0369 522 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Lja6g0369 522 SMART mad3_bub1_i 4 128 IPR013212 -
Lja6g0369 522 MobiDBLite consensus disorder prediction 493 516 - -
Lja6g0369 522 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 5 522 IPR015661 GO:0007094
Lja6g0369 522 Pfam Mad3/BUB1 homology region 1 10 128 IPR013212 -
Lja6g0369 522 MobiDBLite consensus disorder prediction 153 181 - -
Lja6g0369 522 Gene3D - 9 165 - -
Lja6g0369 522 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0369 Lja-Chr6 9416438 9418880 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0369 - - gmx:100806627 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0369 6 9416438 9418880 Lja6g0369 6 9416438 9418880 ECH