Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0364 ATGGCGATTTCAGTTGAAACCTTCTTCAAAGAGAGGAAATACCCATTCATTTTCACCCTCATGGTCTTGCTAATCTGCTTCACGATCCTCCTTTTTGCCAACACCACCTTCACCTTCGATCCAAATAGCTTCTACCCTGATGTCAAAGCGCAACCACTTGAACCCAATTCCCCTGCAACCACAGATTCTTCCCCATTTCCGAAAGATCACGAAGAATCACCTCGTAACTTGACCAGGATCTCTGCCCCAAAAGATCAAGGGTTGTTGCGCCAGTGGGAGGATGTTTTCGGCGGTGTTTCTGATGATTTGAATGTGGATTGGAAGGTTTGTAAGGGTGTGGCAGCGGTGGATTATATACCCTGTTTGGATAACTTGAAGGTGATTAAGGCTTTGAGGACAAGGAGGCATATGGAGCATAGGGAAAGGCATTGTCCTAATCCTAGAAGTAGAACCCGGTGTTTGGTGCCTCTTCCCAAAGGGTATAAGTTTCCGGTGTCGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTCATACAAAGCTACTTGAATACAAGAAGGAGCAACACTGGGTGGTGAAGTCAGGCGAACATCTTGTCTTTCCTGGAGGTGGTACTCAGTTTAAAGAAGGAGTTGACCATTATATTAAGTTCATAGAAAAGACACTGCCCGCAATCCAATGGGGAAAAAATATCAGGGTTATTCTTGACGTTGGTTGTGGAGTAGCTAGCTTTGGTGGAAGTCTTCTTGATAGAAATGTTATTACCATGTCATTTGCACCCAAGGATGAGCATGAAGCTCAAATACAGTTTGCTTTGGAGCGAGGGATTCCAGCAACTCTTTCTGTCATTGGAACCCAAAAGTTGGTATATCCTGACAACGGATTTGATTTGATCCATTGCGCACGATGCAGGGTGCATTGGGATGGAGACGGTGGGAAACCGTTATTTGAGCTCAACAGGATTCTTAGACCTGGCGGTTTCTTTGCATGGTCTGCAACACCAGTTTATCGTGATGATGAAAGAGATCAGAAAGTATGGAAGGCCATGGTGACTATAACAAAAGCAATGTGCTGGACTATTGTGGCTAAGACTCTTGATTCATCTGGAATTGGTCTTGTTATATACCAGAAGCCTACATCATCCGTGTGCTATGAAAAACGCAAACAGAAGAATCCTCCTTTATGTGAAAATCACGAAAGGAAAAATAGCTCATGGTATACCAGACTCAGTGGTTGCATTATTCCTCTTCCAATTGATGGCGCGGGTAATCTGCAGAGCTGGCCCATGTCTTGGCCTCAGAGGCTTACAAGTATACCTCCTAGCTTGTCTACTGAATCATATGCCAGCGAGATATTCAACAAGGACAACAAACTCTGGTCTGAACTAGTTTCAGACGTTTATATAAATGGTCTTTCTGTAAATTGGTCGAGTTTTCGAAATATCATGGACATGAATGCTGGTTATGCAGGATTTGCCGCAGCACTCGTTGATCTACCAGTTTGGGTGATGAATGTAGTACCTATTGATATGCCAGATTCTCTTTCTATTATATTTGACAGAGGGTTAATAGGAATGTACCATGATTGGTGTGAGTCCTTTAACACCTACCCTCGCACATATGATCTTCTTCATGCTAGCTTCCTCTTCAAAAATCTTGAGAAAAGGTGTGACATGGTTGATGTGGTTGTCGAGATCGATCGCATATTGAGACCAGATGGGTATCTCCTCGTTCAGGACTCTATGGAAACTAATAGAAAGCTTGGTCCAATCTTGCGTTCACTTCATTGGTCAGTAACGTTGTATCAAAATCAGTTCCTTGTTGGTAGGAAGAGTTTCTGGCGTCCAAGGCCATAG 1863 0.4359 MAISVETFFKERKYPFIFTLMVLLICFTILLFANTTFTFDPNSFYPDVKAQPLEPNSPATTDSSPFPKDHEESPRNLTRISAPKDQGLLRQWEDVFGGVSDDLNVDWKVCKGVAAVDYIPCLDNLKVIKALRTRRHMEHRERHCPNPRSRTRCLVPLPKGYKFPVSWPKSRDMIWYDNVPHTKLLEYKKEQHWVVKSGEHLVFPGGGTQFKEGVDHYIKFIEKTLPAIQWGKNIRVILDVGCGVASFGGSLLDRNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLVYPDNGFDLIHCARCRVHWDGDGGKPLFELNRILRPGGFFAWSATPVYRDDERDQKVWKAMVTITKAMCWTIVAKTLDSSGIGLVIYQKPTSSVCYEKRKQKNPPLCENHERKNSSWYTRLSGCIIPLPIDGAGNLQSWPMSWPQRLTSIPPSLSTESYASEIFNKDNKLWSELVSDVYINGLSVNWSSFRNIMDMNAGYAGFAAALVDLPVWVMNVVPIDMPDSLSIIFDRGLIGMYHDWCESFNTYPRTYDLLHASFLFKNLEKRCDMVDVVVEIDRILRPDGYLLVQDSMETNRKLGPILRSLHWSVTLYQNQFLVGRKSFWRPRP* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0364 620 CDD AdoMet_MTases 237 331 - -
Lja6g0364 620 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 477 589 IPR029063 -
Lja6g0364 620 Gene3D Vaccinia Virus protein VP39 216 365 IPR029063 -
Lja6g0364 620 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 619 IPR004159 GO:0008168
Lja6g0364 620 PANTHER PMT16, PUTATIVE-RELATED 4 619 - -
Lja6g0364 620 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 141 357 IPR029063 -
Lja6g0364 620 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 117 607 IPR004159 GO:0008168
Lja6g0364 620 MobiDBLite consensus disorder prediction 50 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0364 Lja-Chr6 9223686 9227621 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0364 - - gmx:100808221 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0364 6 9223686 9227621 Lja6g0364 6 9223686 9227621 ECH
Lja6g0364 6 9223686 9227621 Lja6g0364 6 9223686 9227621 PCT