Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0358 ATGATTTCTCGTCTTCTTCGAGCCTATATAAACCGCCAATTCTTAATCTTCCTCCGAAACACCCTCCATTTCCTTCTTCAACAAATCCAAAACCTCTTCCTCACCATGTCAAACCCCAAATCCGAAGCAAAACCCGAACCCTCTTCTTCTTCTTCTGAATCTCCACCACCCTTCGATCCTACACAACCCTCGGTTCCAATTTCATACCCAATCAAGACCCTTCAGGAGCTTGAATCTCGGTCCTATTTTGAATCCTTTCACTACCCTTTCAACAAAGCATCGGTTCCAATTTCCGATGGGGTTTCTTCTTCGTTGCCCAATCGGCGTAGGTTGCTCGTGTGCCATGATATGGCTGGGGGTTACTTGGATGATAAGTGGGTACAAGGTGGTGCCAACCCTGATGCTTATGCAATTTGGCACTGGCATTTGATTGATGTGTTTGTTTACTTTTCTCATGATTTGGTTACTCTTCCTCCTCCTTGTTGGACTAACACTGCTCATCGCCATGGAGTTAAGGTGTTGGGGACTTTCATTACTGAATGGGATGCAGGAAAGGCTGCCTGTGATATATTGCTTTCAACAAAGGAGTCTGCCCAGATGTATGCAGAACGTCTAGCGGAGCTTGCTGTTGATTTAGGCTTTGATGGATGGCTAATAAATATGGAGGTAAATTTGGATCCAGGGAAAATCTCTAATTTGAAAGAGTTTGTAGACCATTTATCATTAAAAATGCATTCTTCTGTGCCTGGATCGTTAGTTATATGGTATGACAGTATTACAATTGATGGTAAATTGAACTGGCAAGATCAACTAAATGAATATAACAAACCGTTCTTTGACATATGCGATGGAATATTTGTAAACTATACATGGAAGGAAAACTATCCAAAGCTCTCTGCTGCTGTTGCCATGGATCGGAAGTTTGATGTTTACATGGGAATTGATGTATTTGGAAGAAACACTTATGGTGGTGGACAGTGGAATGCAAATGTTGCTCTTGATTTACTAAGAAAGGATGACATCTCTGCTGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAGCAACCACCAGATTTTGAGACTGCTCAGAATAGTTGGTGGGGTCTTGTGGGAAAGTCATGGGGAATACTGCGAAATTATCTTGGAGTACTACCATTCTATACAAATTTTGATCAGGGGCGTGGTTATCACATTTCAGTTGATGGAGACCATGTATCAAATGCTAATTGGTGCAACATTTCTTGCCAAGGCTTTCAGCCACTCATTGAGGTTGCTGATCCTACAAATCCTATTCAAGTTCTTGTAGACTTGAAGGAAGCATCATATAGTGGAGGGGGGAACATTACATTCAAAGGATCTCTTGAAAAGAAAACGTACTTTGAGAGGAAAATCTTTCAAGGAGAGTTTCTTTTGAGCGAGTTGCCTATCCACTTTATCTATTCTGTGAAATCTGATGGCAATTCTTTATTGGGACTTAAGCTTGTGCTCACCTCCACCGGCGACAAAAGAACGTCTATTCTTCTCACATCGCAGGCCGTGAATAATTTCTCAAGTAAATTCAGCAAAGTGATCATGGCACGTGAACAAAAGGGATTTTCCCCTGGATGGGTCATAAATGAAGGTGCAATTGCCATGGATGGATTCACTCTAACAGAAATCCATGCAGTTTGCTACATATCTGATTCTCCATTATCAGATGCCAATGATGGTAGTGTGGATTATTTTGCCATTCTTGGTCATATCACAATGAAAACTTCTGATTACAAGTTGGATTTTCCGGTCTCCTCTTCCTGGCTAGTTAGTGGTGAATTCATCAAATTGAATTCAGATTCTCAAGGCTCCAAGACCCTTGATGTTAAAATTTCTTGGACACCGAAAGATGGAAAAAATCATCTATTTTCAAAGTACGTCGTGTATTTGGTAAGATTATCAAAACAAGCAGATGGCAACCCAGGTAGAACATCAGAACATGTTAATGAGGAGTATCTTGGGGTAGCACAAGTGAACTCTTTTTATGTTTCTGACCTCAAAGTTCCTTTGGCCACTTCAAGTCTCAAATTTATAATACAAGTTTGCGGTGTTGATGGGACGATTCAGGAATTGGATGAATCTCCATATTATGAATTGATAGTTGAAGGTCCTTAA 2148 0.4074 MISRLLRAYINRQFLIFLRNTLHFLLQQIQNLFLTMSNPKSEAKPEPSSSSSESPPPFDPTQPSVPISYPIKTLQELESRSYFESFHYPFNKASVPISDGVSSSLPNRRRLLVCHDMAGGYLDDKWVQGGANPDAYAIWHWHLIDVFVYFSHDLVTLPPPCWTNTAHRHGVKVLGTFITEWDAGKAACDILLSTKESAQMYAERLAELAVDLGFDGWLINMEVNLDPGKISNLKEFVDHLSLKMHSSVPGSLVIWYDSITIDGKLNWQDQLNEYNKPFFDICDGIFVNYTWKENYPKLSAAVAMDRKFDVYMGIDVFGRNTYGGGQWNANVALDLLRKDDISAAIFAPGWVYETKQPPDFETAQNSWWGLVGKSWGILRNYLGVLPFYTNFDQGRGYHISVDGDHVSNANWCNISCQGFQPLIEVADPTNPIQVLVDLKEASYSGGGNITFKGSLEKKTYFERKIFQGEFLLSELPIHFIYSVKSDGNSLLGLKLVLTSTGDKRTSILLTSQAVNNFSSKFSKVIMAREQKGFSPGWVINEGAIAMDGFTLTEIHAVCYISDSPLSDANDGSVDYFAILGHITMKTSDYKLDFPVSSSWLVSGEFIKLNSDSQGSKTLDVKISWTPKDGKNHLFSKYVVYLVRLSKQADGNPGRTSEHVNEEYLGVAQVNSFYVSDLKVPLATSSLKFIIQVCGVDGTIQELDESPYYELIVEGP* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0358 715 CDD GH85_ENGase 112 423 - -
Lja6g0358 715 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 2 714 - -
Lja6g0358 715 MobiDBLite consensus disorder prediction 39 65 - -
Lja6g0358 715 Gene3D Glycosidases 61 376 - -
Lja6g0358 715 Gene3D - 383 538 - -
Lja6g0358 715 Pfam Glycosyl hydrolase family 85 121 398 IPR005201 GO:0005737|GO:0033925
Lja6g0358 715 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 2 714 IPR032979 GO:0033925
Lja6g0358 715 MobiDBLite consensus disorder prediction 50 64 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0358 61 713 Glycoside Hydrolase AT5G05460 56.449 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0358 K01227 - gmx:100804658 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0358 6 9100988 9109856 Lja6g0358 6 9100988 9109856 ECH