Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0353 ATGTCAATGATGAAACCACCCTTCTCTTCTTCTTCCTCTTCTCTTCTAATGAGAACCAAACCTCGTCTCTCTCCCTCTCTCTTCATCCTCTTAACTTTCATTCTCCTCGCTGTCATCCACTATGGCCACGACTTCATCTTCATCTTCCGCCCACACAACCTTCAAGCCAATTCGGACGCTGCGCTCTTCCCCACACCCGACTCAGAAACAGAGAGGAGGGAGGAGCAGCAGAAGGTGGAGGAGGATGAAAGGGAGGAGGAGGAGAAATCATCAAGAGGGCACCACTGCGACGTGTTCAGCGGAAGGTGGGTTCGGGACGAGTTGACTCGGCCACTGTACGAGGAATCGGAGTGTCCGTACATACAGCCACAGTTGACTTGTCAACAACACGGCCGGCCCGATGAGGAGTACCGGCGGTGGCGATGGCAGCCTCACGGTTGCGATCTTCCCATATTCAACGCCAGTATGATGCTGGAAACGCTACGTGGGAAGAGGATGATGTTTATTGGAGACTCCCTCAACCGTGGTCAATATGTATCTTTCATATGTCTTATCCATCGACTCATTCCAGAAAATGCCAAATCTATGGAATCTTTTGGTTCACTCACTGTTTTCACAGCCAAGGAATACAATGCGACAATTGAGTTCTATTGGGCACCTTTTCTTCTTGAATCAAACTCCGATGATGCAGTGATCCATAGGGTAACTGATAGGATTGTTAGAAAAGGTTCAATAAATAAGCATGGCCGTAATTGGAAAGGAGCTGATATTGTGGTATTCAACACCTATCTTTGGTGGATTACTGGCTCCAACATGAAGATCTTGCTTGGATCTTTTAATGATGAAGTAAAAGAGATTGTTGAGATGTCAACAGAGGATGCATATCGGATGGCTATGAAAAGTATGCTTAGATGGGTGGGTCGGAACATGGACCCCAACAAGACAAGAGTCTTCTTCACAAGCATGTCACCTTCTCATGCAAAGAGCATAGAGTGGGGAGGTGAAGTAGGAGGGAACTGCTACAATGAGACAACTCCAATTGATGATCCAACATATTGGGGCTCTGATTCTCAGAAAAGCATAATGCAAGTGATTGGAGAAGAGTTTAGGAAATCTAAAGTGCCCATAACATTTCTCAACATCACTCAACTCTCCAACTACCGCAAAGATGCACACACTTCAATCTACAAGAAGCAATGGAACCCTCTGACCCAAGAGCAATTAGCTAACCCTGCTAGCTATGCTGATTGTATCCATTGGTGTTTACCAGGACTTCAAGATACTTGGAATGAGCTTCTATTTGCCAAGTTGTTTTTTCCTTGA 1323 0.4573 MSMMKPPFSSSSSSLLMRTKPRLSPSLFILLTFILLAVIHYGHDFIFIFRPHNLQANSDAALFPTPDSETERREEQQKVEEDEREEEEKSSRGHHCDVFSGRWVRDELTRPLYEESECPYIQPQLTCQQHGRPDEEYRRWRWQPHGCDLPIFNASMMLETLRGKRMMFIGDSLNRGQYVSFICLIHRLIPENAKSMESFGSLTVFTAKEYNATIEFYWAPFLLESNSDDAVIHRVTDRIVRKGSINKHGRNWKGADIVVFNTYLWWITGSNMKILLGSFNDEVKEIVEMSTEDAYRMAMKSMLRWVGRNMDPNKTRVFFTSMSPSHAKSIEWGGEVGGNCYNETTPIDDPTYWGSDSQKSIMQVIGEEFRKSKVPITFLNITQLSNYRKDAHTSIYKKQWNPLTQEQLANPASYADCIHWCLPGLQDTWNELLFAKLFFP* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0353 440 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 13 440 - -
Lja6g0353 440 MobiDBLite consensus disorder prediction 60 93 - -
Lja6g0353 440 MobiDBLite consensus disorder prediction 66 93 - -
Lja6g0353 440 Coils Coil 72 92 - -
Lja6g0353 440 Pfam PMR5 N terminal Domain 95 148 IPR025846 -
Lja6g0353 440 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 440 IPR029962 GO:0016413
Lja6g0353 440 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 149 435 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0353 Lja-Chr6 9024975 9033528 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0353 - - gmx:100782397 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0353 6 9024975 9033528 Lja6g0353 6 9024975 9033528 ECH
Lja6g0353 6 9024975 9033528 Lja6g0353 6 9024975 9033528 PCT