Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0338 ATGGAATCTTCCGCTGCCATTCGATCCTTTCACTGCACTGTGCCCCATGTAAGATCCTCATTTGAGAAGGTAGCTGTAGTTCCCTGCCACAATGCCAGATGGAACTCTAAAAGTGGGCTTTTCATCCAGCGTTTGGCAAACGATCGGATGCTCATTAATTCTCAGGCCAAGGGGAGGAAAACGCTAGTTTCATGCGCAAAAGCAGTTGAAGCTATCAATACAGCTAAATCTGACGCTTCTTTGGATAGCACATCGCAAGACTCAGTAGAGAAAAAAGCTTTGCAATCTGCTACTTTTCCTAATGGATTAGAGGCTTTGGTATTAGAGGTCTGTGATGAGACTGAAATTGCTGAGCTGAAAGTAAAGGTTGGAGAGTTTGAGATGCATCTTAAACGTAACATTGGAGCAACAAAAGCTCCTTTGTCTAACATTTCACCAACTACCCCACCACCTATTCCAAGTAAACCTATGGATGAATCAGCACCCAGTACCCCACAATCATTGCCACCAAAATCATCACCTGAGAAGACCAACCCATTTGTAAATGCTTCCGTGCAGAAGTCATCAAAACTGGCACAATTGGAGGCTTCTGGTACCAATAATTATGTTATAATATCATCTCCTACGGTTGGCTTATTCCGACGTGGTAGAACAGTGAAAGGGAAGAGACAACCTCCTACCTATAAAGAGGGTGATTTAATCAAAGAAGGGCAAGTCATAGGGTATTTGGATCAGTTTGGAACTGGACTTCCTGTTAAGTCTGATGTGGCTGGAGAAGTTTTAAAGCTACTTGTCGAGGATGGAGAGCCCGTTGGTTACGGAGACAATCTTATTGCTGTGTTGCCTTCATTCCATGACATCAAGTGA 867 0.4348 MESSAAIRSFHCTVPHVRSSFEKVAVVPCHNARWNSKSGLFIQRLANDRMLINSQAKGRKTLVSCAKAVEAINTAKSDASLDSTSQDSVEKKALQSATFPNGLEALVLEVCDETEIAELKVKVGEFEMHLKRNIGATKAPLSNISPTTPPPIPSKPMDESAPSTPQSLPPKSSPEKTNPFVNASVQKSSKLAQLEASGTNNYVIISSPTVGLFRRGRTVKGKRQPPTYKEGDLIKEGQVIGYLDQFGTGLPVKSDVAGEVLKLLVEDGEPVGYGDNLIAVLPSFHDIK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0338 288 MobiDBLite consensus disorder prediction 139 180 - -
Lja6g0338 288 SUPERFAMILY Single hybrid motif 196 279 IPR011053 -
Lja6g0338 288 Gene3D - 200 280 - -
Lja6g0338 288 MobiDBLite consensus disorder prediction 144 158 - -
Lja6g0338 288 CDD biotinyl_domain 205 280 - -
Lja6g0338 288 Pfam Biotin-requiring enzyme 221 278 IPR000089 -
Lja6g0338 288 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 288 - -
Lja6g0338 288 MobiDBLite consensus disorder prediction 159 180 - -
Lja6g0338 288 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0338 Lja-Chr6 8659706 8666098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0338 205 282 Acyl Lipid Metabolism Gene Families AT5G15530 29.487 1.26e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0338 - - gmx:100792471 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0338 6 8659706 8666098 Lja6g0338 6 8659706 8666098 ECH