Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja6g0333 | ATGGCTAATGTGGAGGAAGTGAAAGTTGGTTTGCACTGTGATGACTGTATCAAGAAAATCCTCAAGGCCATCAAGAAAATTGAAGATATTGAAACGTATAACGTGGACACACAGCTGAACAAGGTGATTGTTACGGGCAACGTCACAACTGAAGAAGTGATTAGAGTTCTTCAGAAGATTGGTAAGAATGCAACTTCCTGGGAAGATGCTTTGATTGCCGAAAAGTGA | 228 | 0.4079 | MANVEEVKVGLHCDDCIKKILKAIKKIEDIETYNVDTQLNKVIVTGNVTTEEVIRVLQKIGKNATSWEDALIAEK* | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja6g0333 | 75 | PANTHER | HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN | 2 | 70 | - | - | |
| Lja6g0333 | 75 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 2 | 70 | IPR045181 | GO:0046872 | |
| Lja6g0333 | 75 | ProSiteProfiles | Heavy-metal-associated domain profile. | 10 | 66 | IPR006121 | GO:0046872 | |
| Lja6g0333 | 75 | Gene3D | - | 3 | 69 | - | - | |
| Lja6g0333 | 75 | SUPERFAMILY | HMA, heavy metal-associated domain | 4 | 68 | IPR036163 | GO:0046872 | |
| Lja6g0333 | 75 | Pfam | Heavy-metal-associated domain | 7 | 62 | IPR006121 | GO:0046872 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja6g0333 | Lja-Chr6 | 8572815 | 8573683 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja6g0333 | - | - | gmx:100812505 | 113.235 |
Event-related genes