Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0332 ATGGGAAAATCTCTTGAATCTGTGGCTAGGCTACAAGAGTTATCGCGGATTGTGTCATCTGCAAAACCCTACAGGTCAAAGGGAACAGCACAACCCAGATCGGCGAACCGGGTGGCGACGCCGCGAACCGGTGCGAAACCGGCTGCTTTTGCAGTCGAACCGCCGAAGAAGATGGAGGCTGTGGAAGCGGAGCAATGTCGGACACCACTCTCCAAGGTGGTCGCCGATTGCACGAAGCGGTGGTTCCAAGACACGCTCAAGGAGGCCAGGGCTGGAGATAGCGGCATGCAGGTTCTCGTTGGACAAATGTATTACAGTGGCTATGGTGTTCCTAGAGATCCGAGAAAGGGACATGCTTGGATTAGTAAAGCATCAAGAAGTCGAAATTCAGTTTGGAAAGTGAGCGAGAAACCTCCGGGTTACCGAGCGAGTGATTCAGATTCATGTGAACCGGAGGGAAAATGA 465 0.5269 MGKSLESVARLQELSRIVSSAKPYRSKGTAQPRSANRVATPRTGAKPAAFAVEPPKKMEAVEAEQCRTPLSKVVADCTKRWFQDTLKEARAGDSGMQVLVGQMYYSGYGVPRDPRKGHAWISKASRSRNSVWKVSEKPPGYRASDSDSCEPEGK* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0332 154 MobiDBLite consensus disorder prediction 20 46 - -
Lja6g0332 154 MobiDBLite consensus disorder prediction 22 38 - -
Lja6g0332 154 MobiDBLite consensus disorder prediction 113 154 - -
Lja6g0332 154 PANTHER EXPRESSED PROTEIN 1 153 - -
Lja6g0332 154 SMART sel1 94 129 IPR006597 -
Lja6g0332 154 Gene3D Tetratricopeptide repeat domain 52 133 IPR011990 GO:0005515
Lja6g0332 154 SUPERFAMILY HCP-like 87 125 - -
Lja6g0332 154 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0332 Lja-Chr6 8568598 8571353 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0332 - - gmx:100811436 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0332 6 8568598 8571353 Lja6g0332 6 8568598 8571353 ECH