Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0329 ATGGTTTCAGTTGATAATGGTATTGGGATTGGGAATCTCAAAGATGAAATTGAAGAATCTAATGGGACTCCAGTGAATGATTTTGCTTCATTAAATCTTTCAACTTCTAGGGAAACATTTCAGAGTTGCAGTGAAAATCCTCATAGAAGCTCCTTGAGTTCTCTTCTTGACAAAATGAAGTTTGTTAAATTTTGTTCTGCATCTGCCAAATTCAAACAGCCTGTGAAAGACCAGATATCACAATCTGCGTCTTCTCCTCTTTCAGATAGCCTAAAATCGCGTTTCAGTAGCGTGTTTTCCCGGAAACTTGACTGGGGTTCAATCAAGAAAATGAGCTTGGAATGGATCAGAAACCCGATGAACATGGCGCTTTTTGTGTGGATCATCTGTGTTGCTGTATCGGGTGCAATTCTGTTCCTTGTCATGACAGGAATGTTGAATGCGGTTCTACCGAGTAAGTCTCAGAGGAATGCATGGTTTGAAGTGAATAACCAAATACTCAATGCACTGTTTACACTTATGTGTTTGTACCAACACCCAAAGAGGTTTCACCATCTTGTTCTTCTGTTCAGGTGGAGACCAAATGACATCTCTAGACTAAGAAATGTGTATAGCAAGAATGGAACTCATAAGCCTCATGAATGGGCACATATGATGGTAGTGGTCATTCTCCTTCACTTGAACTGTTTTTCTCAATATGCACTTTGTGGTCTAAACTTGGGGTATAAAAGGGCTGAGAGACCTGCCATTGGAGTTGGAATTTGTGTATCTTTCGCAATCGGCGCGCCTGCGATTGCCGGCTTGTACGCCATTCTTAGCCCGCTCGGGAAGGACTACGATTGTGAGATGGATGAAGAAGCACAGGTGAAAAAATATTCATTTGCATCCAAAGATCAACAAAGAGTTATTGAAAAAAAACCAAATTGGAGTGGTGGAGTACTTGACATTTGGAATGATATTTCCTTATCATATCTCTCACTTTTCTGCACTTTCTGTGTCTTCGGGTGGAATATGGAGAGGCTTGGCTTTGGAAACATGTATGTTCACATTGCTACTTTCATGCTGCTGTGTATGGCTCCTTTCTGGATTTTTGTATTGGCTTCGGTTAATATTGATGACGACAATGTTAGACAGGCAATAGTAGCTGTTGGAATTGTCCTTTGTTTTTTCGGTTTATTATATGGCGGGTTTTGGAGGATTCGAATGAGAAAGAGGTTCAATTTACCTGTCTATGACTTCTGTTTTGGCAAACCTTCAGTTTCTGATTGCACACTTTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGCAAGGACTGGGAATAACTATAATCTAGTGGAAGAAAATTTCTGCAGGAAAGAAATTGATAGTGAACAACCTTCAATTTCACCTTTGGCAAGGGAAGATGTAGTAGTATCAACTAACTCTTGCACAAATTCTCCTCTGGGTAACAACTCTTTCCCTTCTGTGATAAAGGCATCTAGTCCTCAAAGTTCAAGCAATGTCTCAAAGGGATGCTATAGTCCAGTTAGGCTTCTATGTACTTTAGGAGAAGAGCATCTTGAAAGAGGTAAGGATGGAATGATGAACCCGCCGACTCCACCATTTATACATAGAGAAGCTCCTTAG 1632 0.4069 MVSVDNGIGIGNLKDEIEESNGTPVNDFASLNLSTSRETFQSCSENPHRSSLSSLLDKMKFVKFCSASAKFKQPVKDQISQSASSPLSDSLKSRFSSVFSRKLDWGSIKKMSLEWIRNPMNMALFVWIICVAVSGAILFLVMTGMLNAVLPSKSQRNAWFEVNNQILNALFTLMCLYQHPKRFHHLVLLFRWRPNDISRLRNVYSKNGTHKPHEWAHMMVVVILLHLNCFSQYALCGLNLGYKRAERPAIGVGICVSFAIGAPAIAGLYAILSPLGKDYDCEMDEEAQVKKYSFASKDQQRVIEKKPNWSGGVLDIWNDISLSYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLLCMAPFWIFVLASVNIDDDNVRQAIVAVGIVLCFFGLLYGGFWRIRMRKRFNLPVYDFCFGKPSVSDCTLWLCCCWCSLAQEARTGNNYNLVEENFCRKEIDSEQPSISPLAREDVVVSTNSCTNSPLGNNSFPSVIKASSPQSSSNVSKGCYSPVRLLCTLGEEHLERGKDGMMNPPTPPFIHREAP* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0329 543 Pfam Protein of unknown function (DUF2985) 114 192 IPR021369 -
Lja6g0329 543 PANTHER - 19 541 - -
Lja6g0329 543 MobiDBLite consensus disorder prediction 524 543 - -
Lja6g0329 543 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 308 440 IPR006461 -
Lja6g0329 543 Pfam PLAC8 family 309 439 IPR006461 -
Lja6g0329 543 PANTHER PLAC8 FAMILY PROTEIN-RELATED 19 541 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0329 - - gmx:100811964 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0329 6 8341991 8344486 Lja6g0329 6 8341991 8344486 ECH
Lja6g0329 6 8341991 8344486 Lja6g0329 6 8341991 8344486 PCT