Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0321 ATGGAGTCAGTTCAATCATGGGTTTCAGAGCACAAGCTCACCAGCATTGGGGCACTCTGGGCCTCTGGGATTGGAGCAACACTTCTAGCTTATTCACGCACTAAGTCTCCAATGAAGCCAAGTCTAAGGCTCATCCATGCTAGGATGCATGCACAGGCACTAACTCTAGCAGTGCTATCAGGAGCAGCTGCTTATCATTATTATGAGAATCGTTCTGTTCTGCCAAATCGAGCAGCAGATAGTCCTGCTCTGAATGTCACCCAGCTTGTTGAATGGGAGCTTCAAAGTCCTTTTTAA 297 0.4714 MESVQSWVSEHKLTSIGALWASGIGATLLAYSRTKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYENRSVLPNRAADSPALNVTQLVEWELQSPF* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0321 98 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Lja6g0321 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 75 - -
Lja6g0321 98 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 75 IPR040153 -
Lja6g0321 98 Pfam Hypoxia induced protein conserved region 10 61 IPR007667 -
Lja6g0321 98 Gene3D - 13 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0321 Lja-Chr6 8110295 8110785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0321 - - gmx:100500345 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0321 6 8110295 8110785 Lja6g0321 6 8110295 8110785 ECH
Lja6g0321 6 8110295 8110785 Lja6g0321 6 8110295 8110785 PCT