Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0320 ATGGAAGAAAAGGCAGAGTGTACCCAAGATGGCACTGTTGATTTTCATGGCCAGCCTGCAATTTCATCCAAAACTGGCAAATGGAAAGCTTGCGCTTTTCTTGTTGGTTATGAAGCTTTTGAAAGGATGGCTTTCTATGGAGTTGCTTCCAATTTGGTGAATTACCTTACAACACAACTCCATGAAGATACTGTTTCTTCAGTGAGGAATGTCAATAACTGGTCAGGATCTGTGTGGGTAACGCCAATTCTCGGGGCTTACATAGCTGATTCTTACTTGGGTCGCTTCTGGACTTTCACACTGTCATCTATTGTTTATGTCATGGGTATGATTCTACTAACAGTGGCCGTATCCCTCAAGAGCCTGAAACCCACATGCACCAACGGAATCTGCAACAAGGCTTCAACCTCACAAATCGTCTTCTTCTACACTGCCCTGTACACCACAGCAATCGGAGCAGGAGGGACCAAACCCAACATCTCCACCTTTGGTGCGGACCAGTTCGACGACTTCAACCCGCATGAGAAGCAGACCAAGGCCTCATTCTTTAACTGGTGGATGTTCACCTCGTTCCTCGGCGCGTTGATCGCCACTCTAGGACTTGTCTACATTCAAGAGAATTTGGGATGGGGACTTGGTTATGGAATCCCCACTTCTGGTCTCCTTTTGTCGCTTGTCATTTTCTATGTAGGGACGCCAATGTATCGCCACAAAGTGAGGAAGACCAGAAGTCCTGCTAGGGATTTGATTCGTGTTCCTGTTGCAGCTTTCAAGAATAGGAAACTCCAACTTCCTAGTGATCCTTCACAACTTTATGAGCAGGATATGCAGCATTATATTGGTAGTGGGAAACGACAAGTGTATCACACTCCAGCTTTGAGGTTTTTGGACAAGGCAGCTATTTTAGAAGACCGAACTGGTTCCACAAGGGTGCCATTGACAGTCACCCAAGTGGAAGGAGCTAAGCTTATCTTTGGCATGATCCTTATATGGCTAGTAACATTGGTTCCCAGCACAATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGCACCACAATGGACAGAAACCTTGGTCCTAATTTTAGAATTCCAGCTGCTTCTCTAGGTAGCTTTGTGACCCTTTCAATGCTTCTATCAGTGCCAATGTATGACCGGTTTTTCGTGCCCTTCATGCGCCGGAAAACCGGCCACCCCAGAGGAATCACATTGCTCCAAAGGCTTGGAATTGGATTTTCAATTCAGATCATAGCCATTGCAATTGCTTATGCAGTTGAAGTTAAAAGAATGCATGTCATAAGAGCAAACCATGTACTTGGTCCTAAAGATATTGTCCCTTTGAGCATCTTTTGGCTGTTACCACAGTATGTTCTAATTGGAATAGCAGATGTGTTTAATGCAATTGGATTGCTGGAATTCTTCTATGATCAATCCCCTGAAGACATGCAGAGTCTTGGAACAACGTTTTTCACAAGTGGGATAGGATTTGGGAACTTCTTGAACAGTTTTCTGGTGACAATGGTTGATAAAATAACTGGAAAGGGTGAGAGTAAGAGCTGGATTGGTGATAACTTGAATGATTGTCACTTGGATTACTATTATGGGTTTTTGTTGGTTCTATCAAGTCTCAATTTGTTGGCATTTCTTTGGGCTTCAAGTAGATACATTTACAAGAGGGAATCAGTTAGGGTCAAAGAGGCCCTTTGTGTTCAAATGGAGGGAAACCCAACTTTGGATGCATCTCTTGGATTACAAGTTTGA 1764 0.4365 MEEKAECTQDGTVDFHGQPAISSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTTQLHEDTVSSVRNVNNWSGSVWVTPILGAYIADSYLGRFWTFTLSSIVYVMGMILLTVAVSLKSLKPTCTNGICNKASTSQIVFFYTALYTTAIGAGGTKPNISTFGADQFDDFNPHEKQTKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIPTSGLLLSLVIFYVGTPMYRHKVRKTRSPARDLIRVPVAAFKNRKLQLPSDPSQLYEQDMQHYIGSGKRQVYHTPALRFLDKAAILEDRTGSTRVPLTVTQVEGAKLIFGMILIWLVTLVPSTIWAQINTLFVKQGTTMDRNLGPNFRIPAASLGSFVTLSMLLSVPMYDRFFVPFMRRKTGHPRGITLLQRLGIGFSIQIIAIAIAYAVEVKRMHVIRANHVLGPKDIVPLSIFWLLPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGFGNFLNSFLVTMVDKITGKGESKSWIGDNLNDCHLDYYYGFLLVLSSLNLLAFLWASSRYIYKRESVRVKEALCVQMEGNPTLDASLGLQV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0320 587 Pfam POT family 96 522 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja6g0320 587 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 12 566 - -
Lja6g0320 587 CDD MFS_NPF5 28 558 IPR044739 GO:0042937|GO:0042938|GO:0071916
Lja6g0320 587 Gene3D MFS general substrate transporter like domains 1 565 IPR036259 -
Lja6g0320 587 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 566 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja6g0320 587 SUPERFAMILY MFS general substrate transporter 22 552 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0320 Lja-Chr6 8062641 8069051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0320 1 582 Organic Solute Cotransporters AT2G40460 72.650 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0320 - - gmx:100815188 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0320 6 8062641 8069051 Lja6g0320 6 8062641 8069051 ECH