Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0312 ATGGACTTCACCGCCAGAGCCTCTTCCCATGCAATTTCTCCTTCACACCCTTATCGCCTTCAACCCTCACCTTTTCCTCACCAGCTTCCATTTTCGAAATTGCAGCGTTTGGGTTTGGTTAAGAATCGCCTCGTTGCTCGTTGCAGTTCTGGTTCTGATGAATTAGGCTCTGTTAATGGGTTGCAATTCACGCCCAATAAGCTTTTTATGCAGGAGGCTATTGGAGCTGAATATGGGGAAGGGTTTGAGACTTTTAGGGCTGATGGACCATTAAAAGTTGATGTGGACTATTTGAATGATAAATTGCAAGACGGTTTTCTTAAGCGCATACGCTATGCTATGAAGCCTGATGAGGCTTATGGTCTTATCTTCTCTTGGGACAATGTGGTGGCTGATACTCGAGCTCTGAAGAGGAAGGCATGGAAGCAGCTGGCCTCTGAAGAGGGAAAGGATATCCCTGAAGATGGTGATATTGAAAGATTGATGCGTCATGCAGGTGCTGATCATGTATTACACAAGCTTTTTCTTTCAGATAGGGAAGATAATGAGCTGGATAGTCTGAAGTTGAGGTTTTCTCAGTTATATTATGATAATCTTCTAAGAATTGAAAGACCAATGGAGGGCCTCAAAGACTGGTTGGAAGCGGTTTCTACAGCCCGCATCCCCTGTGCTATTGTTTCAAGTCTTGATAGAAGAAATATGATGGAAACTTTGGAACGGATGGGGCTCAACAAGTATTTCCAGGCAATTGTAACAGAAGAGGACGGAATGGAGTCAATAGCTCATAGATTTCTTTCTGCCGCTGTCAAGCTGGATCGGAAACCTTCTAAGTGTGTGGTTTTTGAAGATGATCCCAGAGGAGTAGCTGCTGCACATAATTGCACTATGATGGCTATAGCATTAATTGGAGCTCATCCCGCGTATGATTTGAGGCAAGCTGATCTTGCTGTTGCTAACTTTAGTGAACTTTCTGTGATCAACCTGCGAAGATTATTTGCCAACAATGGTTCTACATTTATGGACCTGCAGAAGCAGGTTATAGAGAAAACTCCTTCCAAAAGGAAACTTTCAATAGACACCATTTTCTAA 1089 0.4316 MDFTARASSHAISPSHPYRLQPSPFPHQLPFSKLQRLGLVKNRLVARCSSGSDELGSVNGLQFTPNKLFMQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGFLKRIRYAMKPDEAYGLIFSWDNVVADTRALKRKAWKQLASEEGKDIPEDGDIERLMRHAGADHVLHKLFLSDREDNELDSLKLRFSQLYYDNLLRIERPMEGLKDWLEAVSTARIPCAIVSSLDRRNMMETLERMGLNKYFQAIVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGVAAAHNCTMMAIALIGAHPAYDLRQADLAVANFSELSVINLRRLFANNGSTFMDLQKQVIEKTPSKRKLSIDTIF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0312 362 SUPERFAMILY HAD-like 94 323 IPR036412 -
Lja6g0312 362 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 5 362 - -
Lja6g0312 362 MobiDBLite consensus disorder prediction 1 20 - -
Lja6g0312 362 Gene3D Putative phosphatase; domain 2 132 205 IPR023198 -
Lja6g0312 362 Gene3D - 122 318 IPR023214 -
Lja6g0312 362 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 5 362 - -
Lja6g0312 362 CDD HAD_BPGM-like 121 303 - -
Lja6g0312 362 Pfam Haloacid dehalogenase-like hydrolase 122 300 IPR041492 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0312 - - gmx:100817685 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0312 6 7912137 7918460 Lja6g0312 6 7912137 7918460 ECH