Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0311 ATGGCCGAGGCTGATGAATCCACCGCCGCCGCCGCCGCATTTGGGGTTCCCGGAACGCCTGCTATCAGGGAAGCGAGACCCGAGACGGGGACCCGTAGGATTGATACAGGGTTCGGGTCGGGTGGGAACCCGATTCATGGGGTTAGGAGGGTGAATCTGCGAGCTGAAATTGATACGTCTCCGCCTTTTGAGTCGGTTAAGGAGGCCGTGACCCGTTTCGGTGGTAGCGGGCCTTGGTTACCCCTTTACAGGCTTGGAGAGGCTTTTGACAATTTGGAAGATTTTGACATAAAGAAAGTGGAGGAACAAGCAGCAGAGTTGGAGAAGGATTTGATAGTCAGAGAACTTGAAACACTTGATGTACTTGAAGAGCTGGGAGCTACCAAAAGGATCGTGGAGGAATTAAAGCAGCAACTACAAAAAGATGCGTTGAAATGCTTGGCGACTCCAGATATCAACTCTTGTGAACAGATTGGAACTCCAGTTATTAAGGAGATGAATAAGGAAAATTATGGAAACATTGTCAGCAATCAAGAACAGATGTTACACATTTCTAGCTCCTGCTCTATGTCATCACCTGATCTGATCTTGATGGAGTTGAAAGAAGCCAAAGTAAATCTTGGTCAAACTATAAATGAACTCGAGGTGATTCAATCCTCTGTTGAATCGTTAAATAAGAAAATGAAGAAGGATAAAAGTTTTCTTGAGAGAACTCGTGCAAAGCTAGCGTCAAAGTTTGCAGCTGTCTCTGCTCACGAGAGGGTGCAAGAGCAAACAAGATTGAATCCACCATCATCTCATGCAGAATGCACTTTTGATCAACCTGCTAATAATATGAGGAATTTCAATTCTGATTCTGAACAGCATAATAGAATGGTTGAAACAAGAAGTTCTGAAGGTTCAAATCCATTAACAATCTATGGAGGGCATGGATTCAGTGTTAAGACAGCCGAGATGAGGTTGCTTGCGGCTAAAAAGATGGAAGAAGCTGCAAGGGCAGCTGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTGGTGCTGAGAGAGTGTCAGAGTTTGCTCTGCCGGAACCTGAGAGAGTCACATTTTCTTTTGCACCGCGTTCTCCTCTAACCTTCAGGGATCAGATACCTGAGGACTCGACTCTAAAGAAGGTAATAGATCCAAAGTTTCGTATTGATGAAACCAACATTTCTAAACAGACTATTTTGAAGAAGCTGAAGGAAGCATCAGAAGAAGTTCTACACAGCAAAGAAGTATTGGCAGATGCTTTAAACAGAATTGAGTCTGCAAACAGAAAGCAACGTGCTGCTGAGGAGGCTCTACGGCGATGGATTCCGGAGGCTGATCTGAAGAAGCAAGCAGTGTGCGACTCTTTTAACTGCGACAAGTGTAGTCAAGCTGGAATGTGTCAAGATTCTTCTCTACCAACTAGAGCAAACAATGATCCAAAGCCTGTTTTAAGGCCCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGGATATGATACAAGAAAAGAGATGGAAGAGCACACTGAAAGACAAAAGGTAGCATTGAGTCAAATGCTCCGTGCATTGAGGGAAGATCTAACTGTTCCACCGAAAGCCGAAAAAGACGGGAGTGATCAAAAGCAGTTCGTAGCACAGAGGAAGAAGTTTGGATTCATCCAAATATCATTCCCATTGGCAAAGCCAAGTAAGAAAAAGGCATGA 1731 0.4419 MAEADESTAAAAAFGVPGTPAIREARPETGTRRIDTGFGSGGNPIHGVRRVNLRAEIDTSPPFESVKEAVTRFGGSGPWLPLYRLGEAFDNLEDFDIKKVEEQAAELEKDLIVRELETLDVLEELGATKRIVEELKQQLQKDALKCLATPDINSCEQIGTPVIKEMNKENYGNIVSNQEQMLHISSSCSMSSPDLILMELKEAKVNLGQTINELEVIQSSVESLNKKMKKDKSFLERTRAKLASKFAAVSAHERVQEQTRLNPPSSHAECTFDQPANNMRNFNSDSEQHNRMVETRSSEGSNPLTIYGGHGFSVKTAEMRLLAAKKMEEAARAAEAIALAEIKALSGAERVSEFALPEPERVTFSFAPRSPLTFRDQIPEDSTLKKVIDPKFRIDETNISKQTILKKLKEASEEVLHSKEVLADALNRIESANRKQRAAEEALRRWIPEADLKKQAVCDSFNCDKCSQAGMCQDSSLPTRANNDPKPVLRPTISMRDVLSRKQVPEGYDTRKEMEEHTERQKVALSQMLRALREDLTVPPKAEKDGSDQKQFVAQRKKFGFIQISFPLAKPSKKKA* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0311 576 MobiDBLite consensus disorder prediction 1 41 - -
Lja6g0311 576 Pfam Weak chloroplast movement under blue light 197 449 IPR008545 -
Lja6g0311 576 Pfam Weak chloroplast movement under blue light 55 141 IPR008545 -
Lja6g0311 576 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 575 - -
Lja6g0311 576 Coils Coil 122 142 - -
Lja6g0311 576 Coils Coil 422 442 - -
Lja6g0311 576 Coils Coil 394 414 - -
Lja6g0311 576 Coils Coil 197 217 - -
Lja6g0311 576 Coils Coil 225 245 - -
Lja6g0311 576 Coils Coil 97 117 - -
Lja6g0311 576 PANTHER WEB FAMILY PLANT PROTEIN 3 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0311 Lja-Chr6 7898781 7901903 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0311 - - gmx:100776514 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0311 6 7898781 7901903 Lja6g0311 6 7898781 7901903 PCT