Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0310 ATGTCTGTCCTTCGTACATCTACAGCTGTGTTTTTGCTATGGCATGCCATTGCATTCGTTGTTGTTTCAAATTTGGGCTCTGTTGATGCTGCAAATAGAGACAAGAAACACATAAATCAGGTGATTGTTGCCTACAATGGAGCTGTTGCCACTGATGATCGCCGATGCTCGCGTATTGGGATGGATGCTCTCCGGGAAGGAGGGCATGCTGCGGATGCTGCAGTGGCGGCTGCTCTTTGTTTGGGGGTTGTTAGTCCAGCTTCAAGTGGCCTTGGTGGTGGAGCCTTTATGCTTCTCAGGCTAGCTAATGGGGTGGCAAAGGCCTTTGATATGAGGGAAGTTGCTCCTAGTCTTGCTTCCAAGGACATGTATGGTGGCAATGCTACTTTGAAGGAGAAAGGTGGCCTCTCTGTTGCAGTCCCCGGAGAACTTGCTGGCCTTCACAAAGTGTGGAAACAACATGGGAAGCTCCCATGGGAGAGACTTGTAAAGCCAGCCGAGATTCTTGCCCGGAAGGGATTTAAGATATCGCCATTCCTCCGCTTTCAGTTGGAACGATCAGAGTCAGATGTATTGGAAGATACCGGTCTTGGCAGTGTGTTTGCTCGAAATGGAAAACTCTTGAAGAGAGGAGACATATGCTACAATAAGAAACTTGCAGACACACTCAAAATAATATCCAAGAATGGTCCTCAAGCCTTCTATGGTGGATTGATTGGTCTTAATTTAGTTGAGGATGTTCAGAAGGCTGGAGGGATATTGAGCATGAAAGACCTCAAAAGTTACTCTGTAAAAGAAAAGGAACCCATTTCTACAGATGTTCTTGGACTCAAAATTCTTGGCATGCCTCCAGCTTCAGGGGGGCCTCCAATGATGCTACTGCTGAACATTCTAGCTCAGTATGATCTCCCTTCTGGTATTTCTGGCGCCCTTGGGTACCATCGAGAAATTGAAGCTCTGAAACATGTATTTGCTGTGAGAATGAATCTTGGTGATCCTGATTTTGTAAATGTAACTGGGGTTCTTTCTGATATGCTTTCTCCTAAGTTTGCTAGTGAGTTAAAAAAGGACATCAATGATAGTAAAACTTTTAATGCAAGTCATTATGGTGGCAAGTGGAATCAGATCCTTGATCATGGTACAAGTCATCTAAGCATTGTAGATGTTGAGCGAAATGCTATTTCCATGACCACCACAGTAAATGCATATTTTGGTTCAAAGATCCTTTCACCAAGTACAGGAATAGTACTGAACAATGAGATGGATGATTTTTCCATCCCTAGAAATGTTTCTAAAGATGTTCCTCCACCAGCTCCTGCAAATTTCATCGTGCCAGGGAAGCGACCATTATCATCCATGTCACCAACTATTGCCCTTAAGGATGGAAAATTGAAAGCTGTATTAGGTGCAAGTGGAGGAGCTATGATTATTGCAGGAACTTCAGAGGTTCTTCTGAATCACTTTGTCAAAGGAATGGATCCTTTTTCATCTATAACGGCACCTAGGGTTTATCATCAGCTGATACCTAACGTGGTTAGTTATGAGAATTGGACAACTGTGAGCGGTAAACACATTGAACTTCCTTCTGATATCAGAGAAGCCCTTAGTAGTAAGGGTCATGTTCTTCAGGGCCTTGCTGGAGGGACTATTTGCCAATTTATTGCTGTAGACGATTTAGAGCATTCTGTAAAAAATAAGGGTTTTGGAAAGCTTGTGGCAGTTAGTGATCCAAGAAAGGGTGGTTTTCCTGCTGGCTTCTGA 1761 0.4373 MSVLRTSTAVFLLWHAIAFVVVSNLGSVDAANRDKKHINQVIVAYNGAVATDDRRCSRIGMDALREGGHAADAAVAAALCLGVVSPASSGLGGGAFMLLRLANGVAKAFDMREVAPSLASKDMYGGNATLKEKGGLSVAVPGELAGLHKVWKQHGKLPWERLVKPAEILARKGFKISPFLRFQLERSESDVLEDTGLGSVFARNGKLLKRGDICYNKKLADTLKIISKNGPQAFYGGLIGLNLVEDVQKAGGILSMKDLKSYSVKEKEPISTDVLGLKILGMPPASGGPPMMLLLNILAQYDLPSGISGALGYHREIEALKHVFAVRMNLGDPDFVNVTGVLSDMLSPKFASELKKDINDSKTFNASHYGGKWNQILDHGTSHLSIVDVERNAISMTTTVNAYFGSKILSPSTGIVLNNEMDDFSIPRNVSKDVPPPAPANFIVPGKRPLSSMSPTIALKDGKLKAVLGASGGAMIIAGTSEVLLNHFVKGMDPFSSITAPRVYHQLIPNVVSYENWTTVSGKHIELPSDIREALSSKGHVLQGLAGGTICQFIAVDDLEHSVKNKGFGKLVAVSDPRKGGFPAGF* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0310 586 Gene3D - 269 373 IPR043138 -
Lja6g0310 586 Pfam Gamma-glutamyltranspeptidase 62 581 - -
Lja6g0310 586 TIGRFAM g_glut_trans: gamma-glutamyltransferase 49 540 IPR000101 GO:0006751|GO:0036374
Lja6g0310 586 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 40 586 IPR029055 -
Lja6g0310 586 PANTHER GLUTATHIONE HYDROLASE 1-RELATED 31 585 - -
Lja6g0310 586 Gene3D - 377 586 IPR043137 -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 445 460 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 69 94 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 155 174 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 253 269 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 469 486 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 381 399 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 282 301 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 405 423 - -
Lja6g0310 586 PRINTS Gamma-glutamyltranspeptidase signature 137 155 - -
Lja6g0310 586 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 31 585 IPR000101 GO:0006751|GO:0036374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0310 Lja-Chr6 7859849 7864322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0310 1 586 Miscellaneous Gene Families AT4G39640 63.837 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0310 K18592 - gmx:100797040 922.154