Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0296 ATGGACTCGGATTCTCCCTCTCCCAGATCCGAATCCCAAACGGACCCTCTCCTCCGCGACCCGTTCGACGAGCTCTGCCACGACCTCTCCTCCCTCCAAGACCTCGCCAGCTGCGGCGCGTGGCGCTCCGTCATCGACAAGGTCTCACGCGCCAGAGCCCTCTCTCTCCTCCACAAGCCCCACGACCACCTCACCTACCTCGCCTTCAACGCCCTCGCCTTCACCAAGCTCCGCCGTTTCAACGAAGCCTCCGCCGAGCTCGACTCCATGGAGGATCTCGACAGCGCGCACTACCGCTACGAAACCTACCCGAAAATCTACCCGAACCGGGTCGGATCCATGGTCCCGTTCTCCCTCCGGTGGCTCCACGCTCTGATTCCGATCAAATTGGGCCAACGCCAGCAAGGGATGGACCGGTTGTACCGCCTTCTCGATTTCGTGCGGGAGAAGATTAAGGACAAGGAGAACAGTAATCTCAGCGTTTCGCTTGGTATGTGGAGAAAGCGAGAGGTTTTCGTTGTGAATTGCGTGATTGGGCACCATTTGAGTCACAAGGAGTTTGGTGCGTGCTTGAGTTTGATGAAGGAGTTGCTTTCTCGCGATTCTTCGGACCCGATTTTGATTTCGCAGCTGGGGTATATGCAATTGCAAATTGGGGACTTGGAGGGCGCGAAAGTTTCGTTTATGAAGGTGGAAAATGAGGGGAAGAATCATGGGTCGTTGAGTGAGGTTGAGTATCAGAATCTTGTGAACAGAAATAAGGCATTGGTGTATATGGTTGGGAAGGATTATGTGTCTGCAGTGAGGGAGTATGAGGAGTGCATTGAGAGGGATTCGACTGATGTGGTTGCTGTGAACAATAAGGCTCTCAGTTTGATGTATTTGAGGGACTTGTCGGATTCGATCAAGGTGTTGGAAAATGCACTTGAAAGGGTTCCTACTGTGGCTCTCAATGAGACTATTGTTGTCAATTTGTGTAGTATGTACGAGTTGGCTTATGTTAATCACTCTGATATTAAGAGAACGCTTAGTAGTTGGATTGCTCGCGTTGCTCCGGATGACTTTGATTCAACGTGTACTCGTACGTGA 1089 0.5179 MDSDSPSPRSESQTDPLLRDPFDELCHDLSSLQDLASCGAWRSVIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSMEDLDSAHYRYETYPKIYPNRVGSMVPFSLRWLHALIPIKLGQRQQGMDRLYRLLDFVREKIKDKENSNLSVSLGMWRKREVFVVNCVIGHHLSHKEFGACLSLMKELLSRDSSDPILISQLGYMQLQIGDLEGAKVSFMKVENEGKNHGSLSEVEYQNLVNRNKALVYMVGKDYVSAVREYEECIERDSTDVVAVNNKALSLMYLRDLSDSIKVLENALERVPTVALNETIVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDSTCTRT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0296 362 SUPERFAMILY TPR-like 194 317 IPR011990 GO:0005515
Lja6g0296 362 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 23 361 - -
Lja6g0296 362 Gene3D Tetratricopeptide repeat domain 34 341 IPR011990 GO:0005515
Lja6g0296 362 SMART tpr_5 248 281 IPR019734 GO:0005515
Lja6g0296 362 SMART tpr_5 205 238 IPR019734 GO:0005515
Lja6g0296 362 SMART tpr_5 282 315 IPR019734 GO:0005515
Lja6g0296 362 Coils Coil 137 157 - -
Lja6g0296 362 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 23 361 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0296 K20309 - gmx:100779691 616.69