Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja6g0285 | ATGGCAATCAAACTGAGGTTCCTCGCTCTCCTCCTTCTCCTCTCGCTATTCTCCCTCGGAACCGTCACATCGGACGAAGAAGATTGCGTGTACACAGTGTACGTTCGAACCGGGTCGATCATCAAGGGGGGAACAGACTCAATAATCGGGCTCAAACTATACGACAAATACGGCTACTACATATACATAACAAACTTGGAAGCATGGGGCGGGTTAATGGAACCGGGTCACAACTACTACGAGCGTGGCAACCTGGATATATTCAGTGGAAGAGGGCCTTGTCTTGAAGGATCCGTTTGTGCTGTCAACTTGACTTCAGACGGGTCGGGTCCTCATCATGGGTGGTACTGTAACTACGTGGAGGTTACCACCACCGGGGTGCACTTACCGTGTGCTCAGCAGCAGTTCACGGTGGAGCAGTGGCTGGCTACCGACACTTCACCTTATCGCCTATGGGCTGTCAATAATTACTGTAATAATGACTTGGGCCAGGCCCGGCCCAAGCCCATGTATAAGCCCATGTCCACATCTATGATTACGTCGAGGACTGGTTCTGGTTTCTCTATTTTGGACTCTACTGTCCTTGTAGGGACAGATAAGTAA | 603 | 0.5041 | MAIKLRFLALLLLLSLFSLGTVTSDEEDCVYTVYVRTGSIIKGGTDSIIGLKLYDKYGYYIYITNLEAWGGLMEPGHNYYERGNLDIFSGRGPCLEGSVCAVNLTSDGSGPHHGWYCNYVEVTTTGVHLPCAQQQFTVEQWLATDTSPYRLWAVNNYCNNDLGQARPKPMYKPMSTSMITSRTGSGFSILDSTVLVGTDK* | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja6g0285 | 200 | Pfam | PLAT/LH2 domain | 31 | 148 | IPR001024 | GO:0005515 | |
| Lja6g0285 | 200 | CDD | PLAT_plant_stress | 29 | 156 | - | - | |
| Lja6g0285 | 200 | PANTHER | PLAT-PLANT-STRESS PROTEIN | 1 | 195 | - | - | |
| Lja6g0285 | 200 | Gene3D | PLAT/LH2 domain | 17 | 148 | - | - | |
| Lja6g0285 | 200 | PANTHER | - | 1 | 195 | - | - | |
| Lja6g0285 | 200 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 30 | 147 | IPR036392 | GO:0005515 | |
| Lja6g0285 | 200 | ProSiteProfiles | PLAT domain profile. | 29 | 156 | IPR001024 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja6g0285 | Lja-Chr6 | 6935695 | 6936916 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja6g0285 | - | - | adu:107469134 | 289.271 |