Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0283 ATGGATTCTGCCAACAGTGGCAGCATGCAATCCTCCAGCACCGGTGCTGATGAAGAGTACGATTCACGCGCCGATTCATCATCATCACTCTCTGCTTTCTTAAACCATAACAACCACAACAACCACCCTCCACCACCACAACCACCACCACCAACAACAACAAACCATGTTGGTGTTGGTGGTCTCTTTAACCATCATCTAAACGCTGCACACCACTTCGACCCTTTTTCCAATTACCTGGATTCAATTCAAACTTCCCCAAACCTGGACATGGTTTGGTCAAGATCATCATCGGCCGCTGTCAGAACCGAACCAAACCAATCCGATCTCAGTAACAACCAAGCTTTTCTCTTGAACCAATTTGCTGCGGGCGCCGCGACGGTTCCGGGCTCGCAGCAATTATCTATGCCTCCAGAAAATGCTCATCAAGCTCAAAGCAATAACAGCAACAACAACAACCAAGTTCGGAACCCGAAGAAACGGTCGAGAGCTTCTCGCCGCGCTCCAACCACCGTGCTCACCACAGACACCACCAATTTCAGAGCCATGGTTCAGGAATTCACTGGAATTCCAGCACCTCCTTTCAGTTCCTCACATTTCCCAAGAACAAGGTTGGATCTGTTTGGTGCTTCATCTGCTGCTAGTTCGACACCACCTTATCTTCTTCGCCCTTTTGCACAGAAAATTAAACCTCCTCCTCCTCCACCTCCTCAGCCTTCAACTAATTCAACCAATTCAACTTCCATTAACTACCTGCAGCAGCAGCAGCAACAACAGTTTCCTCTGAACATGCAGAATAATACATTTCAATCCATTGTCCAAGCACCTCAAAAATATTCAATTGGGAATTCTTCTCTGGTTTCCCCCAAGACTCAATCTTCCTTGGAAATCCCGCCCGCTACAGTGGATTCCCATCTGAAAATGAGTGTCATGGAGGGATTAGGATTAATGAGCCATGCGCATGTTAACACCCAAATCGGTTCTCTTCATCAGAACATGGTTCCTTCATCATCTGATGAAGGAGCATTGTTGTCCAGGATCAACAACATTCACAATTCTTCAGGCAACTGGGCACAAAGAATGGGTGCCAATGCCATTGCCAACAATGATGGTGATCATCATGGAGGAGTTTTTTTGGGGTCTCTTGGTGGCAGATCAAGTAACATTATTCCAGAGGGAGTGCCGAACGGCGGCTCCTCGCCTTCTCCGTCGGATTTTCATGGAGAGAAAGGACCTGAGCGTGTTGTGGCGGCGAGAAGCGAAGGTACGGTGGAGTCATGGATTAATTGTTCTTCTGAATGA 1302 0.4754 MDSANSGSMQSSSTGADEEYDSRADSSSSLSAFLNHNNHNNHPPPPQPPPPTTTNHVGVGGLFNHHLNAAHHFDPFSNYLDSIQTSPNLDMVWSRSSSAAVRTEPNQSDLSNNQAFLLNQFAAGAATVPGSQQLSMPPENAHQAQSNNSNNNNQVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFSSSHFPRTRLDLFGASSAASSTPPYLLRPFAQKIKPPPPPPPQPSTNSTNSTSINYLQQQQQQQFPLNMQNNTFQSIVQAPQKYSIGNSSLVSPKTQSSLEIPPATVDSHLKMSVMEGLGLMSHAHVNTQIGSLHQNMVPSSSDEGALLSRINNIHNSSGNWAQRMGANAIANNDGDHHGGVFLGSLGGRSSNIIPEGVPNGGSSPSPSDFHGEKGPERVVAARSEGTVESWINCSSE* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0283 433 MobiDBLite consensus disorder prediction 130 158 - -
Lja6g0283 433 MobiDBLite consensus disorder prediction 225 241 - -
Lja6g0283 433 MobiDBLite consensus disorder prediction 130 177 - -
Lja6g0283 433 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 430 - -
Lja6g0283 433 MobiDBLite consensus disorder prediction 25 40 - -
Lja6g0283 433 MobiDBLite consensus disorder prediction 1 17 - -
Lja6g0283 433 MobiDBLite consensus disorder prediction 388 433 - -
Lja6g0283 433 MobiDBLite consensus disorder prediction 224 246 - -
Lja6g0283 433 MobiDBLite consensus disorder prediction 1 60 - -
Lja6g0283 433 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 430 IPR039609 -
Lja6g0283 433 Pfam VQ motif 167 194 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0283 Lja-Chr6 6888286 6890796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0283 - - lja:Lj0g3v0276279.1 728.783