Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja6g0272 | ATGGAACTTCCATCTTTCAGCTGTGAGATAAGAATAATACAAGCCCAAAATGTCGGGATCACGAAAAACTTATTTGCAAGGTTGTATCTTCCTGCAGGAAACAACAGATCAAGCATTCAACTCAACAGTAAAATGGTATCTTCCAAATCCAACCCTTGTTGGAATGAGTCCTTCAGTCTAGATTGTTCGTGTTCTGAAGAATTCTTAGAGACCCTTCAGAAGGAAAGCCTGGTGTTAGAGCTAAGGCAAAGCAGCGCGGCTACAAAAGTGTTAAGGAGGATTTTTGGAGGGTCACGTCTTGTGGGGAAGTGTGAGATTCCATGGAAGGCAATTCTTGAATCACAAAACATGGAGTTCAAAGAGTGGGTGAAGATTGATTCATGTGATGAAGACTCTTCCACCACCTTCAGTGTACCAGAAGTGCAAGTGGAGATCAAAATAAAAGTAGTGGCTTCGGAAAAGAAAGACAATAGCTCAAAAAGATTGAACAAGTGGGATGAGTGTGGGTGTAAACAAGGTCATGATCATCATGCATGGTGCAGCGCTGAAGATTATCATGTCTTTTCTTTTGGTGCTGCTTTAGAGGCTTTTTGA | 594 | 0.4158 | MELPSFSCEIRIIQAQNVGITKNLFARLYLPAGNNRSSIQLNSKMVSSKSNPCWNESFSLDCSCSEEFLETLQKESLVLELRQSSAATKVLRRIFGGSRLVGKCEIPWKAILESQNMEFKEWVKIDSCDEDSSTTFSVPEVQVEIKIKVVASEKKDNSSKRLNKWDECGCKQGHDHHAWCSAEDYHVFSFGAALEAF* | 198 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja6g0272 | 197 | PANTHER | OSJNBA0006M15.15 PROTEIN | 2 | 197 | - | - | |
| Lja6g0272 | 197 | Gene3D | C2 domain | 1 | 155 | IPR035892 | - | |
| Lja6g0272 | 197 | SMART | C2_3c | 7 | 120 | IPR000008 | - | |
| Lja6g0272 | 197 | Pfam | C2 domain | 9 | 118 | IPR000008 | - | |
| Lja6g0272 | 197 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 125 | IPR035892 | - | |
| Lja6g0272 | 197 | ProSiteProfiles | C2 domain profile. | 1 | 123 | IPR000008 | - | |
| Lja6g0272 | 197 | PANTHER | OSJNBA0006M15.15 PROTEIN | 2 | 197 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja6g0272 | Lja-Chr6 | 6655895 | 6656488 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja6g0272 | - | - | lja:Lj0g3v0316049.1 | 288.885 |