Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0269 ATGGGAAAGAAGCCATCTCTGCGCACCAAAGCAACCGACTTTGTTTATGCCGTTCTCAACCCCATCTCTGATTCTAATGATCACAATCACAAACCTTCCAAACACCCTCCATCACCTTCCGAAGAAGTAGGTGAAACAGAAATAAGTGCATCAGAGACTTCTGATGAAGAGGGTAGCCATGGTTTAGATGGTGGACCTGATACTTCATCCTTCACTGCTTTCCTCTATTCTTTTGTGTCATCCTCAGACACTAAAACAGACAAACATGGGCAGAATGATGAGAAAAGTGAACCTGATAATATTAACCCTTTACCAGACTCTTCCTTGAAAGAAAATGGTCGAAGGAAAAGTTTGTTTTCTAGAGGTAAGCAATCACTTGGTAGAGCGATTCGCCACGCTACGAGAATCGGTGGATTTCGCCACCATGACCGTCGCAAAGATAATGTAGAAATGAAATATGATGATGGGCATTGTTCTAAAATTTCTACTGTTGAGCCTGTGAAAGAGTCAGTGCACAGGCCTTTGGTTGATCTGCCAGAAATTTCTGAACCTTCGGTTCTCCTCTCTGAGGGTATGAGAAGTGTTCTCTATGCTTCTCTTCCACCTCTTGTGCATGGAAGGAAATGGCTGCTGCTATACAGCACTTGGAGGCATGGTGTGACTCTTTCAACTCTTTACAGAAGAAGCATGCTTTCACCTGGATCGTGTTTGCTGGTTGTTGGAGACCAAAGAGGAGCAGTGTTTGGTAGCTTGGTTGAAGCACCTATGAGACCATCCAATAGGAGAAAATACCAGGGAACAAACAATACATATGTTTTCACAAACATCTCTGGTCATCCTGTTATATATCGCCCAACAGGGGTTAACCGCTATTTCACGCTTTGCAACACTGACTACATAGCAATTGGTGGGGGAGGTCATTTTGCGCTTTATTTGGATGGAGATCTATTGAATGGCTCAAGTTCAGTCTCTGAAACTTATGGGAATCCTTGCCTTGCAAATTCTCAGGAATTTGAAGTGAAGGAAGTAGAGTTGTGGGGCTTTGTACAAACTTCAAAATATGAGGAAGTACTCGCATTGAGCAGAACAGAGACACCTGGGATCTGTCGATGGTAA 1116 0.4337 MGKKPSLRTKATDFVYAVLNPISDSNDHNHKPSKHPPSPSEEVGETEISASETSDEEGSHGLDGGPDTSSFTAFLYSFVSSSDTKTDKHGQNDEKSEPDNINPLPDSSLKENGRRKSLFSRGKQSLGRAIRHATRIGGFRHHDRRKDNVEMKYDDGHCSKISTVEPVKESVHRPLVDLPEISEPSVLLSEGMRSVLYASLPPLVHGRKWLLLYSTWRHGVTLSTLYRRSMLSPGSCLLVVGDQRGAVFGSLVEAPMRPSNRRKYQGTNNTYVFTNISGHPVIYRPTGVNRYFTLCNTDYIAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQEFEVKEVELWGFVQTSKYEEVLALSRTETPGICRW* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0269 371 ProSiteProfiles TLDc domain profile. 186 349 IPR006571 -
Lja6g0269 371 MobiDBLite consensus disorder prediction 27 41 - -
Lja6g0269 371 SMART 109ultra 185 349 IPR006571 -
Lja6g0269 371 MobiDBLite consensus disorder prediction 82 125 - -
Lja6g0269 371 MobiDBLite consensus disorder prediction 20 69 - -
Lja6g0269 371 Pfam TLD 211 348 IPR006571 -
Lja6g0269 371 MobiDBLite consensus disorder prediction 86 100 - -
Lja6g0269 371 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 364 - -
Lja6g0269 371 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0269 Lja-Chr6 6608188 6615363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0269 208 356 EF-hand Containing Proteins AT5G06260 27.673 2.46e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0269 - - gmx:100804124 524.242