Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0225 ATGGCCTACATCGCCACGGTTGGTGGAAGAAGCATGACCAGCAGCGTGACCACAGTGGACTGTCAGAAACAAGTTCGATCATGGCGGCTCCTTCGTTCCCTCATGGAACTTCTAATCCCCACTTGCAATATTTGCACCTTCCAAGAAGAACAAAATCAAGACGCCAATGAAAAGCGTCTTCACAAACCATCAACAATGATGGTTTCTGGAGACGCTCTCATGACCTCCACAACTATCACCGGCACTCTTCTTGGATCCCGCAAGGGAAAAGTCAGCTTCTGTATCCAGGCCAACGCTAACTCTACCGACCCGATTCTCTTCTTAGAGCTTTCGATTCCAACGAGCGTTTTAGCGAAGGAAATGAGAGGAGGGACGCTCAGGATCGTGCTAGAGAGTGCTAGTACTACTACTACTTCTACTACTACTCTATTTTCGACGCCTCTGTGGACCATGTATTGCAATGGGAGAAGGGTTGGGTATGCGGTTAACCGCAGGCCTTCAAATGCTGACTTTGAAGCGTTGACCGTGATGCGTTCCGTTGATGTTGGTACTGGTGTAATAAATCATGGCAAGGAATTTCATCATGAAGAGAATGATCAGGAGCTTACGTACCTCAGAGCAAACTTTCAAAGGGTTCGTGGCGGCTCCTCCACCTCCAGTTCCTCCTCCCACTGTGAATCGTTCCATTTGATTGATCCTGAAGGATTCATTGGCCAAGAGCTTAGTATTTTCTTTTTCAGGTCAACAAGGTGA 753 0.4768 MAYIATVGGRSMTSSVTTVDCQKQVRSWRLLRSLMELLIPTCNICTFQEEQNQDANEKRLHKPSTMMVSGDALMTSTTITGTLLGSRKGKVSFCIQANANSTDPILFLELSIPTSVLAKEMRGGTLRIVLESASTTTTSTTTLFSTPLWTMYCNGRRVGYAVNRRPSNADFEALTVMRSVDVGTGVINHGKEFHHEENDQELTYLRANFQRVRGGSSTSSSSSHCESFHLIDPEGFIGQELSIFFFRSTR* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0225 250 PANTHER - 12 248 - -
Lja6g0225 250 Pfam Protein of unknown function, DUF617 79 247 IPR006460 GO:0010274
Lja6g0225 250 PANTHER DUF617 FAMILY PROTEIN 12 248 - -
Lja6g0225 250 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 79 248 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0225 Lja-Chr6 4633449 4634457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0225 - - lja:Lj0g3v0219709.1 463.766