Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0218 ATGGGGATCAATACTCGCAGTCTTACTACCAGAAAACCAAGTGAAATTATGAGGCTCTTTGTGACAACTTTTATTGGAGTGGTTTTCGGCTTCTTTATAGGAGTATCATTTCCCACATTGTCAATAACAAAGCTGAATCTTCCTTCTGGTCTGCTTCCCTCCATTGATCTCTCGTACCTTGAAGACAGATATACAAGTCGACATGCTTGGTCTTTTATAAATAAAAGTAACAGAAGTCCATCTGTAGATCACTCATCAAATGATACATCAAAGATTTGGGTTCCATCAAATCCGAAAGGCGCAGAAAGATTACCTCCTGGGATTGTTGAACCTGAGACAGACTTTTATTTGCGTAGATTGTGGGGTAAGCCCAGTGAGGATTTAACGTCCAAGCCAAAGTACCTTGTAACCTTCACTGTTGGCTATGATCAAAAGCATAATATTGATGCAGCTGTGAAAAAGTTCTCAGAGAACTTCACAATCCTTCTATTTCATTATGATGGCCGAACCACTGAATGGGAAGAGTTTGAATGGTCAAAGAGGGCTATTCATGTGAGTGCTCGTAAACAGACCAAATGGTGGTATGCCAAGCGGTTTCTGCACCCTGACATTGTGGCACCATATGACTATATATTTATATGGGATGAAGACCTGGGCGTTGAGCATTTTAATGCAGAAGCATACTTAAAACTAGTGAGGAAGCATGGCTTGGAGATTTCACAGCCTGGTCTGGAACCTAATAAAGGATTGACATGGCAAATGACAAAAAGAAGAGGTGATAGTGAAGTCCACAAAATGACAGAGGAGAAACCGGGATGGTGTTCTGATCCTCATTTGCCTCCTTGTGCAGCGTTTGTTGAGATTATGGCTCCAGTATTTTCACGTGATGCATGGCGTTGTGTGTGGCATATGATTCAGAATGACTTGGTCCATGGGTGGGGTCTTGATTTTGCTCTTAGAAGATGTGTTGAGCCTGCTCATGAGAAGATTGGAGTTGTTGATTCTCAATGGATTGTTCACCAAGGTGTTCCCACACTAGGGAATCAGGGTGAATCGAAAACCGGTGGGAAACCATGGCAGGGGGTGAGGGAGAGGTGTAAAAAGGAGTGGACCATGTTCCAGAGTCGGTTGGCCTATGCAGAAAACGCGTACTTCAAGTCCATTGGAGTTGATCTTTCTAACTCCACTGCTCATTAG 1197 0.4302 MGINTRSLTTRKPSEIMRLFVTTFIGVVFGFFIGVSFPTLSITKLNLPSGLLPSIDLSYLEDRYTSRHAWSFINKSNRSPSVDHSSNDTSKIWVPSNPKGAERLPPGIVEPETDFYLRRLWGKPSEDLTSKPKYLVTFTVGYDQKHNIDAAVKKFSENFTILLFHYDGRTTEWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEAYLKLVRKHGLEISQPGLEPNKGLTWQMTKRRGDSEVHKMTEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIVHQGVPTLGNQGESKTGGKPWQGVRERCKKEWTMFQSRLAYAENAYFKSIGVDLSNSTAH* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0218 398 Pfam Protein of unknown function (DUF707) 96 382 IPR007877 -
Lja6g0218 398 PANTHER BNAA02G13400D PROTEIN 1 397 - -
Lja6g0218 398 PANTHER OS06G0731900 PROTEIN 1 397 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0218 Lja-Chr6 4378707 4383432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0218 - - gmx:100778486 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0767 4 6388740 6394373 Lja6g0218 6 4378707 4383432 PCT