Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0213 ATGGCGGAGCTCCGGCACTCGTCGTCACTCGGCAGCCGAGCCACTTCTTCTCCGATGAAACGAGACGGCGTCGCCGCCGATTCCTCCCCTCTCATCCCCGCCGATCGCCACTCCCCTAAGGACCGCGACCGCCCACTCTTCCACCACCTATGCTCCGACGAGCCTAGGGTTCCTCCTCTTTTCAACTCCAGGATCTCTCTATTCTTCACCTTGCTTCTACTTCTCCTTGCCTTGCTCTCCTTATTCGTCATCCTCCATAAATTGAATTCTCCTTACTTGTGTAAGAAAAATGGGATTGTTCTTCACTGTCCACATGTGAAAGAATCAGCATCTCTTTGGGAAAATCCTTACTCATCCACCACATCTTGGAAGCCTTGTGCCGAGCGTCGCAATGGTGTTATATCAGAACTTCCTCCTGAAAGTGAAACAAGTGGGTATATATTCATTCATGCTGAAGGTGGCCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTAGCAAAAATAATGAATGCCACTCTTATTTTGCCAGTGTTGAAGCAGGACCAGATTTGGAAAGACCAAACGAAATTCGAAGACATCTTTGACGTGGATCACTTCATTGACTACTTGAAGGATGATGTTCGTATTGTCCATGATATACCGGAATGGTTTACTGATAAAACAGAGCTATTTTCTAGTATAAGACGGACTGTAAAAAACATTCCAAAATATGCACCTGCACAGTTTTACATTGACAATGTTCTGCCCCGAATCAAGGAGAAGAAGATTATGGCTCTGAAACCTTTTGTTGATAGGCTAGGATATGACAATGTTCCTACAGAAATCAACAAGTTGAGATGCCGGGTTAATTATCATGCTTTGAAATTTCTTCCTGATATAGAGCAGATGGCTGATTTATTAGCATCAAGAATGAGAAACCGAACAGGAAGTTCAAATCCTTACATGGCTCTGCATCTTAGATTCGAGAAAGGAATGGTGGGTCTATCATTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGCTAAGATGGCAGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCACCTATGGCAATTGGCTCTGCAAAAGCGGAAGGAGGGACGATGTCCTCTAGAGCCTGCAGAAGTGGCTGTTATTCTTCGGGCTATGGGCTACCCAAAGGAAACTCAAATTTATGTAGCTTCTGGGCAAGTGTATGGTGGACAGAACCGGATGGCACCGCTCAGGAATATGTTCCCTAATCTGGTCACAAAGGAGGAGTTGGCAACTAAAGATGAATTAGATGGTTTCAGAAAGCATGTAACAAGCCTTGCAGCTCTTGACTTCTTGGTGTGCTTGAAATCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGTTGATCATTGGTGCCCGGAGATACATGGGTCACCGTCTAAAATCAATTAAACCTGACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACTTTTGTAGAAGATGTAGTCGTTACTCACCAGACACGGACGGGATTGCCGGAAGAGACTTTCCCTAACTATGACCTATGGGAGAACCCTCTGACTCCTTGCATGTGTAAAGCCTAA 1629 0.4512 MAELRHSSSLGSRATSSPMKRDGVAADSSPLIPADRHSPKDRDRPLFHHLCSDEPRVPPLFNSRISLFFTLLLLLLALLSLFVILHKLNSPYLCKKNGIVLHCPHVKESASLWENPYSSTTSWKPCAERRNGVISELPPESETSGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKDDVRIVHDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPTEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPAEVAVILRAMGYPKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKDELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCKA* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0213 542 MobiDBLite consensus disorder prediction 1 42 - -
Lja6g0213 542 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 542 - -
Lja6g0213 542 CDD O-FucT_plant 146 481 IPR024709 -
Lja6g0213 542 Gene3D - 287 485 - -
Lja6g0213 542 Pfam GDP-fucose protein O-fucosyltransferase 146 478 IPR019378 -
Lja6g0213 542 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 542 - -
Lja6g0213 542 PIRSF UCP009360 31 542 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0213 Lja-Chr6 4264776 4273288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0213 112 541 Miscellaneous Gene Families AT1G22460 35.698 6.87e-93 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0213 - - gmx:100809112 979.548