Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3369 ATGGAGAGCGAAAAGAAATCGTCGGCAATATCTGATGTGGGAGCATGGGCTATGAACATTGTCAGCTCCGTTGGAATTATCATGGCTAATAAACAGCTCATGTCCAACAATGGCTATGCTTTCAGCTTCGCTACTACATTGACTGGGTTCCACTTTGCTGTAACTGCTCTCGTGGGTCTAGTGTCAAATGCTACCGGTTATTCTGCGTCAAAGCATGTTCCTTTGTGGGAGCTTCTTTGGTTCTCAGCGATTGCCAATGTGTCTATCACGGGGATGAACCTCAGCCTCATGCTCAACTCTGTTGGATTCTACCAAATATCAAAACTAAGCATGATTCCGGTGGTCTGTGTGATGGAATGGATCCTTCACAGCAAGAACTACTCAAGGGAAGTGAAAATGTCAGTCATGGTTGTGGTTATTGGTGTTGGTGTTTGCACTGTAACTGATGTAAAAGTCAACCTCAAAGGTTTCGTGTGTGCCTGCCTAGCAATTTTGTCAACATCTTTACAGCAAATTTCAATTGGTTCTCTACAAAAGAAATATTCGATTGGATCTTTTGAATTGTTGAGTAAAACTGCTCCTATTCAAGCCGTCTCTCTTCTAGTTCTTGGTCCATTTATTGATTACTACCTTAGCGCCAAGTTGATAACCAACTATAAAATGTCTTCCGGTGCCATTTTATTCATTCTTCTTTCGTGCACCCTAGCTGTATTTTGCAATGTGAGTCAGTACCTTTGCATTGGGCGCTTCTCAGCTGTTTCCTTCCAGGTTTTAGGCCACATGAAAACAGTTTGTGTTCTCACGTTGGGGTGGTTGCTATTTGATTCAGAGCTAACTTTCAAGAATATCATGGGAATGGTTCTTGCAGTTGTTGGCATGGTAATTTATAGTTGGGCTGTGGAGGTTGAAAAGCAGTCAAACGCCAAGACTCTTCCTCATTCGAAAAACAGCCTAACGGAAGAAGAAATAAGACTATTGAAGGCTGGAGTAGAAAACAACCCGTTGAAGGATGTTGAACTTGGTGAGGCCAAAGGTTAG 1038 0.4249 MESEKKSSAISDVGAWAMNIVSSVGIIMANKQLMSNNGYAFSFATTLTGFHFAVTALVGLVSNATGYSASKHVPLWELLWFSAIANVSITGMNLSLMLNSVGFYQISKLSMIPVVCVMEWILHSKNYSREVKMSVMVVVIGVGVCTVTDVKVNLKGFVCACLAILSTSLQQISIGSLQKKYSIGSFELLSKTAPIQAVSLLVLGPFIDYYLSAKLITNYKMSSGAILFILLSCTLAVFCNVSQYLCIGRFSAVSFQVLGHMKTVCVLTLGWLLFDSELTFKNIMGMVLAVVGMVIYSWAVEVEKQSNAKTLPHSKNSLTEEEIRLLKAGVENNPLKDVELGEAKG* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3369 345 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Lja5g3369 345 PANTHER SOLUTE CARRIER FAMILY 35 5 321 - -
Lja5g3369 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 298 - -
Lja5g3369 345 PANTHER UDP-GALACTOSE TRANSPORTER 2-LIKE 5 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3369 Lja-Chr5 65816264 65823803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3369 93 336 Organic Solute Cotransporters AT1G77610 25.703 3.60e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3369 - - gmx:100817847 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3369 5 65816264 65823803 Lja5g3369 5 65816264 65823803 ECH