Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3329 ATGAGGAAGTGGACGCTCCCTTCCGCGCTTCTTCTCCTCTCTCTCCTCTTCCTCCTCTGTGCAGATCAAGGTCGCAAGTTTCAGGCGAATGCAGAAGGCGATTCCGACGAGCTCGTAGATCCACCTAAGGTGGAGGACAAGATCGGTGCTGTTCCTCATGGACTCTCAACCGATTCAGATGTGGCCAAGAGGGAGGCGGAGTCGATCTCGAAGAGATCGCTACGGAGCAACGCGGAGAAGTTTGAGTTCCAAGCGGAAGTGTCACGGCTGATGGATATTATCATCAACTCACTCTACAGTAACAAAGATATTTTCCTCAGGGAGTTGATCTCCAATGCTTCTGACGCATTGGACAAGATTAGGTTCCTCTCCCTCACGGATAAGGAGGTTTTGGGTGAAGGTGACAACACCAAGCTTGATATCCAGATTAAGTTAGACAAGGAAAAGAAAATTCTCTCAATTCGAGACAGAGGTATTGGTATGACAAAGGAGGATTTGATAAAGAATTTGGGAACCATTGCAAAATCCGGAACTTCAGCATTCGTTGAGAAAATGCAGACTAGTGGAGATCTCAATCTCATCGGGCAGTTTGGAGTGGGTTTCTACTCTGTTTATCTTGTTGCGGACTACGTTGAAGTCATTAGCAAGCATAATGATGATAATCAGTATGTATGGGAGTCAAAAGCTGATGGAGCATTTGCAATTTCAGAAGATACATGGAATGAACCCCTAGGACGTGGAACTGAGATTAGATTACACCTCAAAGAAGAGGCTGGGGAGTACTTAGAAGAGTTTAAGCTGAAAGAGTTGGTGAAACGATACTCTGAATTCATTAACTTCCCTATTTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGATGAGTCCAGTGATGATGACGAATCAGCTGAACCCAAGGAAGAAAGTGAAGAAGATGAAGATGCTGATAAAAGTGAAGATGAAGAAAAGAAGCCTAAGACAAAGACGGTGAAGGAAACAACTTATGAGTGGGAACTTCTAAATGATGTAAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACAGAGGAAGAGTATACCAAATTCTACAAGTCTCTGGCGAAGGACTTTAGCGATGAGAAACCTTTATCATGGAGTCACTTTACTGCTGAAGGAGATGTAGAGTTCAAGGCAGTTCTGTTTGTGCCACCAAAGGCACCTCAGGATTTATATGAGAGTTATTATAACTCTAACAAATCCAACCTGAAGTTGTTTGTTAGAAGAGTGTTCATTTCAGACGAATTTGATGAATTGTTGCCTAAGTATCTAAGCTTTTTGAAGGGCCTTGTTGATTCTGATACACTGCCACTTAATGTATCACGAGAAATGCTTCAAGCACACAGTAGTCTAAAGACGATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTCGGATTGCTGATGAGGACCCTGATGAGTCCACTGACAAAGAAAAGAAAGAAGAGACATCCTCTGACATTGATGAGAAGAGAGGTCAATATGCTAAGTTCTGGAATGAGTTTGGGAAGTCCATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAACCGTTTGGCAAAACTGCTGAGAGTTGAGACATCTAAATCTGAGGGCAAATTGACTTCTCTTGATCAGTACATATCTAGAATGAAAGCTGGTCAGAAGGATATCTTTTACATAACTGGATCCAGCAAAGAACAACTGGAAAATTCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTCGAGGTTATTTACTTCACGGATCCAGTTGATGAGTACTTGATGCAATACCTGATGGATTATGAAGATAAGAAGTTCCAAAATGTGTCCAAGGAAGGTCTGAAACTTGGGAAGGATACAAAAGACAAAGAACTGAAGGAATCCTTCAAGGATCTTACTAAGTGGTGGAAAAATTCCCTTGCCAGTGAGAATGTTGATGATGTGAAGATATCCAACAGATTGGATAACACTCCTTGTGTAGTGGTGACATCAAAATATGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCAGATGCTAGCAAGCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCAATCCTAGGCACCCTATTATCAAGGAACTCAGAGAGAGAGTAGTTAAGAACCCTGAGGATGAGAGTGTGAAGCAAACAGCACAGCTGATGTACCAGACTGCACTCTTTGAAAGTGGCTTCCTGCTTAATGATCCCAAGGATTTTGCTTCCCGGATTTATGATTCAGTGAAGTCTAGCTTAGAGATCAGTCCTGATGCAACAGTTGAAGAGGAAGATGACACTGAAGTTGAGGCTGAAAGTGAAACAAAAGAAGATGCATCTACTTCAGAACCTGCAGGTGATGCGGTTAATGATGCTGATGCTGATGTCAAGGACGAGTTGTAG 2463 0.4239 MRKWTLPSALLLLSLLFLLCADQGRKFQANAEGDSDELVDPPKVEDKIGAVPHGLSTDSDVAKREAESISKRSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDNQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLEEFKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDESSDDDESAEPKEESEEDEDADKSEDEEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYKSLAKDFSDEKPLSWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNSNKSNLKLFVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQAHSSLKTIKKKLIRKALDMIRRIADEDPDESTDKEKKEETSSDIDEKRGQYAKFWNEFGKSIKLGIIEDATNRNRLAKLLRVETSKSEGKLTSLDQYISRMKAGQKDIFYITGSSKEQLENSPFLERLKKKNFEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKDLTKWWKNSLASENVDDVKISNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDESVKQTAQLMYQTALFESGFLLNDPKDFASRIYDSVKSSLEISPDATVEEEDDTEVEAESETKEDASTSEPAGDAVNDADADVKDEL* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3329 820 MobiDBLite consensus disorder prediction 772 820 - -
Lja5g3329 820 MobiDBLite consensus disorder prediction 778 793 - -
Lja5g3329 820 SMART HKATPase_4 101 258 IPR003594 -
Lja5g3329 820 ProSitePatterns Heat shock hsp90 proteins family signature. 99 108 IPR019805 GO:0005524|GO:0006457|GO:0051082
Lja5g3329 820 MobiDBLite consensus disorder prediction 294 323 - -
Lja5g3329 820 Hamap Chaperone protein HtpG [htpG]. 76 770 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g3329 820 PIRSF HSP90_HTPG 55 813 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g3329 820 Gene3D - 347 539 - -
Lja5g3329 820 PRINTS 90kDa heat shock protein signature 79 99 IPR020575 -
Lja5g3329 820 PRINTS 90kDa heat shock protein signature 264 282 IPR020575 -
Lja5g3329 820 PRINTS 90kDa heat shock protein signature 100 122 IPR020575 -
Lja5g3329 820 PRINTS 90kDa heat shock protein signature 151 168 IPR020575 -
Lja5g3329 820 PRINTS 90kDa heat shock protein signature 246 263 IPR020575 -
Lja5g3329 820 PRINTS 90kDa heat shock protein signature 169 186 IPR020575 -
Lja5g3329 820 PRINTS 90kDa heat shock protein signature 194 216 IPR020575 -
Lja5g3329 820 SUPERFAMILY HSP90 C-terminal domain 646 768 IPR037196 -
Lja5g3329 820 CDD HATPase_Hsp90-like 88 278 - -
Lja5g3329 820 PANTHER BNAA08G14800D PROTEIN 19 806 - -
Lja5g3329 820 SUPERFAMILY Ribosomal protein S5 domain 2-like 348 627 IPR020568 -
Lja5g3329 820 MobiDBLite consensus disorder prediction 294 334 - -
Lja5g3329 820 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 806 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g3329 820 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 102 257 IPR003594 -
Lja5g3329 820 Gene3D - 66 301 IPR036890 -
Lja5g3329 820 Pfam Hsp90 protein 260 799 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lja5g3329 820 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 79 288 IPR036890 -
Lja5g3329 820 MobiDBLite consensus disorder prediction 487 508 - -
Lja5g3329 820 Gene3D - 634 780 IPR037196 -
Lja5g3329 820 Gene3D - 540 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3329 Lja-Chr5 64733753 64739128 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3329 K09487 - gmx:100779976 1365.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3329 5 64733753 64739128 Lja5g3329 5 64733753 64739128 ECH