Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3326 ATGGGGTCGGTTTGCTCAGCTGGTAAGGCAGAGATAAATAAAAATGGAGGGAAGACCTTGGGGTGTGGGGGAAAGCTTGAGAAATTGAAGAGCTTTGTTAAGAAGAGCGGAGGTTGTTATTCAAATTCAAAGACTAGTGATCGTGGTAAAATGGAGAAGAAGCGCAACTCTACATTTTCAGGTGAATTCAAGATATCCAATCCAAGTGAAATGGGGAGAAAACAGGTCTCTCAAAGAAGCTCCTTTCTAGGGCGAGCTGGTGAGAGGGCAGTCGAAGTCCTGGACACACTTGGAAGTAGCATGCCTAAGTTAAACACCAGCAATGGGTTTAGCTCTAGCATGGTGGCTCCTAGAGGGAATAAAATATCAATATTGGCATTTGAAGTAGCTAATACAATAAGCAGGGGAGAAATTCTGTTTCAATCATTGTCTGAAGAAGACATTCAGTCCCTTGAAAAGGAAATTGAAGAATCAGAAGGGGTGCAAAACCTAGTATCTACTGATAAAAAGGAGTTAATCAGTTTTCTTGAGGCTGACAAAAGGAAAGAATTCAATTCTTTCTCCCGTGAAGTAGCTAGATTTGGAAATTCATGTAAAGACCCTCAGTGGCATCACCTAGATCGATATTTCTCCAGGTTAGATTTAGATGTCTTGACCAACACACAACCTAGGGTAGAGGTAGAGAAGACAATGCAGGAGTTGACGGCTCTAGCTCACGATACTGCTGAATTATACCAAGAGTTGAGTGCTTTAGAACGTTTTGAACAAGATTATCAACAGAAAGTTAAGGAAATGGAGTCTTTAAATCTTCCCCTCAATGGGGAAAGCCTTACAGCTTTTCGGAGTGAGCTAAAGCATCAAAGAAAACTTGTGAGGAGCTTGAAAAAGAAATCCCTTTGGTCCAGAGATTTGGAGGAGATAGTTGAAAAGCTAGTTGATATTGTTATCCATATACATCAAGCAATTTTGGAGTATCTTGGAAATTATGGTACAACCAGTATCCAGCATAGTGAGGGTTCTCAAAGGCTTGGTGTAGCTGGTCTTGCACTGCACTATGCTAATATTATCAATCAGATAAATATAATTGCATCTCGACCAAGTGTTCTTCCTCCAAACGTAAGGGACACATTGTATCATGGGTTGCCCATTAGTATTAAAAATGTTCTTCCTTCACGGTTACAAAATGATGATTACACAAAAGAGGTCAAAGCTGAAATGGATAAGATTCTCCAGTGGCTTACTCCATTTGCCACAAATACGACCAAAGCACATCAAGGTTTTGGATGGGTTGGAGAATGGGCAAATACAAGCAATGTGTTTGGCCAAAAGACCGCCAAAGAAAGTAACTTGATTCGCCTCCAGACACTTGAATACGCGGATAAGCAGAAGATAGATTTTTACATCTTGGAATTGTTGGCTCGGCTTCACCATTTGGTTACCTTTGTGAGATACAGACATAACAATAATAATAGTCATGTTGGCACAAAGACAATGCCTAAACGAATTACTTCTTCTCCAAAGGGACTTCATCTTCAGTCAAAGATGTTGCAGTTTATATCCTTGGACCGTGTCAGCACTCAACTTTCTGAAGAGGATAGGAGGTTGTTAGAGAAAGTAGCTAAGAGGAAATGGACTCCAGGGGTTAGCAAAAGTGAGAATCTTGCAGGGATCAAGAAAACAGAAGCCACAGTTTGGCATTTCAGCAACAGTGTTGGGAGTTCACCCGTTAAGAGGCTTTTAGCTATGCAACCTCAAAGGTATGACGTTTTGGATGTCATGGATGGACTATAA 1791 0.4082 MGSVCSAGKAEINKNGGKTLGCGGKLEKLKSFVKKSGGCYSNSKTSDRGKMEKKRNSTFSGEFKISNPSEMGRKQVSQRSSFLGRAGERAVEVLDTLGSSMPKLNTSNGFSSSMVAPRGNKISILAFEVANTISRGEILFQSLSEEDIQSLEKEIEESEGVQNLVSTDKKELISFLEADKRKEFNSFSREVARFGNSCKDPQWHHLDRYFSRLDLDVLTNTQPRVEVEKTMQELTALAHDTAELYQELSALERFEQDYQQKVKEMESLNLPLNGESLTAFRSELKHQRKLVRSLKKKSLWSRDLEEIVEKLVDIVIHIHQAILEYLGNYGTTSIQHSEGSQRLGVAGLALHYANIINQINIIASRPSVLPPNVRDTLYHGLPISIKNVLPSRLQNDDYTKEVKAEMDKILQWLTPFATNTTKAHQGFGWVGEWANTSNVFGQKTAKESNLIRLQTLEYADKQKIDFYILELLARLHHLVTFVRYRHNNNNSHVGTKTMPKRITSSPKGLHLQSKMLQFISLDRVSTQLSEEDRRLLEKVAKRKWTPGVSKSENLAGIKKTEATVWHFSNSVGSSPVKRLLAMQPQRYDVLDVMDGL* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3326 596 MobiDBLite consensus disorder prediction 60 76 - -
Lja5g3326 596 Pfam Protein of unknown function (DUF668) 342 422 IPR007700 GO:0045927
Lja5g3326 596 MobiDBLite consensus disorder prediction 41 76 - -
Lja5g3326 596 PANTHER DUF668 FAMILY PROTEIN 1 596 - -
Lja5g3326 596 PANTHER OS01G0873900 PROTEIN 1 596 IPR045021 GO:0045927
Lja5g3326 596 Pfam Domain of unknown function (DUF3475) 124 180 IPR021864 GO:0045927
Lja5g3326 596 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3326 Lja-Chr5 64691516 64696309 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3326 - - gmx:100785193 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3326 5 64691516 64696309 Lja5g3326 5 64691516 64696309 ECH