Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3276 ATGGCGAGGCATTCGCCGGCGTGGTTGACGGCAATGCCGAAGAACTGGTTTCCCCTGCTAGTGCTAGCGGCGGTCTTGTCTCTCTCAACCGTCACCCTCCTCTTCATCCGAACCACTTCCGATTCCTGCAACGCTTCTCAGCCTCATCCCGAGCTTCATGTTCCGCCGTCGCCGGAACCGTCCCTGGAGTTCATGAAGTCGAAGCGGGTTCTGATGGTCTCGCACGAACTCTCTCTCTCCGGCGGTCCTCTGCTGCTCATGGAGTTGGCGTTTCTGTTGCGCGGTGTCGGCTCCGACGTCGTTTGGATCACCAACCAGAAGCCTCTGCAATCTGACGACATTGTGTACAGTTTGGAGAATAAGATGTTGGACAGAGGGGTGCAGGTTTTGGCTGCAAGAGGCAAAGAGGCTGTGGATACGGCTCTTAAGGCGGACCTAGTGATTCTGAACACTGCTGTGGCCGGGAAGTGGCTTGATGCGGTTCTCAAGGAAAAAGTTTCGGAGGTTCTTCCAAAGGTTTTGTGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAATGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCAATGATCGATTCCCATACCACCGCAGAGTACTGGAAGAATAGGACTAGGGAGCGTTTAGGGATTAAAATGCCTGAAACTTATGTTGTGCATCTTGGAAATAGCAAGGAGCTAATGGAGGTTGCGGAAGATGGTGTAGCAAAGAGGGTTCTTCGTGAGCATGTCCGACAATCTCTTGGATTGAGAAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCACGTGGTAAAGGGCAAGATCTATTTCTTCGGTCCTTTTATGAAAGTTTGCTACTCATCCAAGAGAAGAAACTGCAGGTTCCATCTTTGCATGCTGTAGTTGTAGGGAGTGATATGAGTGCACAGACAAAGTTTGAAATGGAGTTACGTAATTTTGTCATAGAGAAAAAAATCCAGGACCGTGTTCACTTTGTTAACAAAACTCTGGCAGTGGCTCCCTACCTTGCTTCTATTGATGTTCTGGTTCAGAATTCTCAGGCACGGGGAGAATGCTTTGGGAGGATAACCATTGAAGCAATGGCATTTCGCTTGCCTGTACTTGGAACTGCGGCTGGGGGCACTGTGGAGATTGTGGTAAACAGGACAACTGGTTTACTGCATCCTGTTGGAAAAGAAGGTGTGACACCTCTTGCAAATAACATTGTGAATTTGGCAACTCATGTTGAGAGAAGGCTGACAATGGGAAAGAAAGGATACGAGAGAGTGAAGGAGAGATTTCTAGAGCCCCATATGGCGAATAGAATCGCATTGGTTCTGAAGGAAGTGTTACGGAAGGGTAGACACAATTAA 1386 0.4784 MARHSPAWLTAMPKNWFPLLVLAAVLSLSTVTLLFIRTTSDSCNASQPHPELHVPPSPEPSLEFMKSKRVLMVSHELSLSGGPLLLMELAFLLRGVGSDVVWITNQKPLQSDDIVYSLENKMLDRGVQVLAARGKEAVDTALKADLVILNTAVAGKWLDAVLKEKVSEVLPKVLWWIHEMRGHYFKMEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEVAEDGVAKRVLREHVRQSLGLRNDDLLFAIINSVSRGKGQDLFLRSFYESLLLIQEKKLQVPSLHAVVVGSDMSAQTKFEMELRNFVIEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNRTTGLLHPVGKEGVTPLANNIVNLATHVERRLTMGKKGYERVKERFLEPHMANRIALVLKEVLRKGRHN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3276 461 PANTHER GLYCOSYLTRANSFERASE 1 459 - -
Lja5g3276 461 Pfam Glycosyl-transferase family 4 66 244 IPR041693 -
Lja5g3276 461 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 459 - -
Lja5g3276 461 CDD GT4_PimA-like 121 452 - -
Lja5g3276 461 Gene3D Glycogen Phosphorylase B; 242 438 - -
Lja5g3276 461 Pfam Glycosyl transferases group 1 252 432 IPR001296 GO:0016757
Lja5g3276 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 70 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3276 Lja-Chr5 63219256 63223772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3276 33 459 Glycosyltransferase AT1G75420 76.157 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3276 - - aprc:113847885 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3276 5 63219256 63223772 Lja5g3276 5 63219256 63223772 ECH