Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3258 ATGGGTTCGGCAGCCAAAACAGTTTGCGTTACAGGGAGTACCGGTTTCATCGGGTCATGGCTTGTCATGAGACTCATGGAGGGCGGCTACACAGTTCGAGCCACCGTACAACGCGACCCAGATAACATGAAGAAGGTGAAGCATTTGCTGGAACTGCCTGGTGCAAAGACCAACCTGACTATTTGGAACGCCGATCTTACTGAAGAGGGAAGCTTTGATGAAGCCATCAATGGATGCTCCGGAGTTTTCCATGTGGCCAGCCCCATGGACTTTAATTCCAAGGATCCTGAGAATGAAGTGATCAAGCCTTCCATAAACGGGGTGCTAGACATCATGAAAGCATGCCAGAAAGCTAAAACTGTACGGAGGCTGGTTTTCACATCCTCCGCAGGTACCCTCAACGCTGTAGAGCACCAAAAACAAATGTGTGATGAGAGCTGCTGGAGTGACGTTGAGTTCTGCCGGAGAGTAAAGATGACCGGTTGGATGTATTTTGTTTCAAAGACACTGGCAGAGCAAGAAGCGTGGAAATTTGCCCAAGAGCATGACATTGACTTCATTACAATCATTCCATCCCTTGTTGTTGGTTCCTTTCTAATGCCGACATTGCCACCTAGCCTAACCACCGCTCTTTCTCCCATCACCGGAAACGAGGCCCATTATTCGATTATAAAGCAAGGCCAATATGTCCACTTGGATGATCTTTGTCTAGCTCACATTTTCCTGTTCGAGCACCCTAAATCAGAAGGAAGGTATATCTGTAGTGCATCTGAGGCTACTATCCATGACATTGCAAAGTTAATTAACTCAAAGTATCCAGAGTACAATGTCCCGACTAAGTTCAAGAATATTCCAGATGAATTGGAGCTTGTCAGATTTTCATCAAAGAAGATCAAAGACATGGGATTCGAATTTAAATACAGCTTAGAGGATATGTACACTGGAGCAATTGACACATGCAAGGAAAAAGGGCTTCTTCCTAAAGCTGCAGAAAATCCAAGCAATGGCATAACAGAGAAATAA 1023 0.4516 MGSAAKTVCVTGSTGFIGSWLVMRLMEGGYTVRATVQRDPDNMKKVKHLLELPGAKTNLTIWNADLTEEGSFDEAINGCSGVFHVASPMDFNSKDPENEVIKPSINGVLDIMKACQKAKTVRRLVFTSSAGTLNAVEHQKQMCDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAQEHDIDFITIIPSLVVGSFLMPTLPPSLTTALSPITGNEAHYSIIKQGQYVHLDDLCLAHIFLFEHPKSEGRYICSASEATIHDIAKLINSKYPEYNVPTKFKNIPDELELVRFSSKKIKDMGFEFKYSLEDMYTGAIDTCKEKGLLPKAAENPSNGITEK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3258 340 Gene3D - 1 338 - -
Lja5g3258 340 CDD FR_SDR_e 8 303 - -
Lja5g3258 340 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 331 - -
Lja5g3258 340 Pfam NAD dependent epimerase/dehydratase family 8 249 IPR001509 -
Lja5g3258 340 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 331 - -
Lja5g3258 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 320 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3258 Lja-Chr5 62934980 62936934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3258 1 326 Miscellaneous Gene Families AT1G09510 41.641 1.34e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3258 K13082 - gmx:548087 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3258 5 62934980 62936934 Lja5g3258 5 62934980 62936934 ECH