Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3256 ATGAGTTCCGAGTCTGAAACGGTTTGCGTTACAGGGGCTGCTGGTTTCATCGGGTCATGGCTTGTCATGAGACTCATCGAGCGTGGCTACACGGTTCGAGCCACCGTCCGAGACCCAGCAAACATGAAGAAGGTGAAGCATTTGCTAGAACTGCCAGATGCAAAGACCAAATTGTCCTTATGGAAAGCTGATCTTGCTGAAGAGGGAAGCTTTGATGAAGCCATTAGAGGGTGCACTGGAGTTTTCCATGTGGCGACACCCATGGATTTTGAGTCCAAGGACCCTGAGAATGAAGTGATAAAGCCAACAATAAACGGATTGTTAGACATCTTGAAAGCATGTGAGAAGGCCAAAACTGTGAGAAGGTTGGTATTCACATCCTCAGCAGGGACTGTGGATGTTACAGAGCACCCAAAGCCTGTTATTGATGAAACTTGCTGGAGTGACATTGAGTTCTGCCTCAGAGTCAAGATGACTGGCTGGATGTATTTCGTTTCCAAGACACGAGCAGAACAAGAAGCGTGGAAATATGCCAAAGAGCACAACATAGACTTCGTCTCTGTCATTCCACCTCTTGTAGTTGGCCCATTTCTCATGCCAACAATGCCACCTAGCCTAATCACTGCTCTCTCACTCATCACAGGAAATGAGGCCCATTACTCAATCATAAAGCAAGGCCAATATGTCCACTTAGACGACCTTTGTCTTGCTCACATATTCTTGTTTGAGAACCCAAAAGCCCAAGGGAGATACATGTGCTCTGCATATGAGGCCACCATTCATGAAGTTGCAAGAATGATCAACAAAAAGTACCCTGAGTTCAATGTTCCCACAAAGTTCAAGGATATTCCAGATGAATTGGACATCATTAAATTTTCTTCAAAGAAGATCACAGACTTGGGGTTCAAATTTAAGTACAGCTTAGAGGATATGTACACAGGAGCCGTCGAAACCTGCAGAGAAAAGGGGCTTCTTCCTAAAACTGCTGAAACTCCAGCTACTAATGGCACAACTCAGAAATAA 1023 0.4497 MSSESETVCVTGAAGFIGSWLVMRLIERGYTVRATVRDPANMKKVKHLLELPDAKTKLSLWKADLAEEGSFDEAIRGCTGVFHVATPMDFESKDPENEVIKPTINGLLDILKACEKAKTVRRLVFTSSAGTVDVTEHPKPVIDETCWSDIEFCLRVKMTGWMYFVSKTRAEQEAWKYAKEHNIDFVSVIPPLVVGPFLMPTMPPSLITALSLITGNEAHYSIIKQGQYVHLDDLCLAHIFLFENPKAQGRYMCSAYEATIHEVARMINKKYPEFNVPTKFKDIPDELDIIKFSSKKITDLGFKFKYSLEDMYTGAVETCREKGLLPKTAETPATNGTTQK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3256 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 320 IPR036291 -
Lja5g3256 340 Gene3D - 1 337 - -
Lja5g3256 340 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 330 - -
Lja5g3256 340 CDD FR_SDR_e 8 302 - -
Lja5g3256 340 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 3 330 - -
Lja5g3256 340 Pfam NAD dependent epimerase/dehydratase family 8 248 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3256 Lja-Chr5 62923457 62926657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3256 1 319 Miscellaneous Gene Families AT1G09510 42.154 2.79e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3256 K13082 - gmx:732626 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3256 5 62923457 62926657 Lja5g3256 5 62923457 62926657 ECH