Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3255 ATGGCAACAATTTCTCACAACTTTCTAGTTCAATCTGACACGGGATCTTTCTCCACTGTGATTCTCTCCCCTTCTTATTTTCCTTCTTCTCCAATTTTCCGCCAATTCGCCCGTTTCCCTCGCATTTCCACTTCGCCTTTTCCTCTGAAAATCGCATGCCGCGCCTCTTCCGTTGAACCATCTTCCGTCACCGCAAAAACTGAGGTGAAGGATTTTCTTCACATAAATGATTTCGACAAGGACACTATCACGAAGATCTTAAATCGGGCCATTGAAGTGAAGGCACAGATAAAATCAGGGGACAGGACATTTAAACCATTTCAAGGGATGACATTGGCGATGGTGTTTGCAAAGCCATCATTGAGAACTCATGTTTCATTTGAGACTGGCTTTTCATTGTTAGGTGGTCATGCTGTGTATTTAGCACCTGAAGATATCCAAATGGGCACCAGAGAGGAGACTCGTGATGTTGCTCGCATTTTGTCTCGCTTCACTGACATTATTATGGCTCGTGTTTTCACACATGAGGACATACTCACTCTTTCAAAGCATGCAACTGTGCCAGTCATCAATGGATTGACAGACTACAACCATCCCTGCCAGATAATGGCTGATGCCATCACTCTAATTGAGCACCTTGGTCGGGTGGAAGGCAACAAGGTTGCATATGTTGGAGATGGAAATAATGTTGTCCACTCATGGTTGGAGTTGGCAAGTTTATTCCCTATTCACTTTGTTTGTGCGAGTCCAAAGGGTTTTGAGCCTGATGCCAAAACAGTGGAGAAGGCACGCCAGGTTGGAATCAGCAAGATTGAGATAACTAATGATCCCAGAGAAGCTGTCAAAGGAGCTGACATTGTTTATACGGATGTTTGGGCTAGCATGGGGCAAAAGGAAGAGGCTGAGAAGCGCCGTGAAGCCTTCAAAGGATTTCAGGTGGACCAAAGTCTTATGGATATAGCTGGGTCAAAAGCACTTTTCATGCATTGTTTACCAGCAGAAAAAGGAGTGGAGGTGACTGAGGAAGTTATTGAAGGTCCAAAGTCAATCATCTTCCCGCAAGCTGAGAATCGATTACATGCACAGAATGGCATAATGCTCCATGTCCTTGGCAAGTAA 1119 0.4468 MATISHNFLVQSDTGSFSTVILSPSYFPSSPIFRQFARFPRISTSPFPLKIACRASSVEPSSVTAKTEVKDFLHINDFDKDTITKILNRAIEVKAQIKSGDRTFKPFQGMTLAMVFAKPSLRTHVSFETGFSLLGGHAVYLAPEDIQMGTREETRDVARILSRFTDIIMARVFTHEDILTLSKHATVPVINGLTDYNHPCQIMADAITLIEHLGRVEGNKVAYVGDGNNVVHSWLELASLFPIHFVCASPKGFEPDAKTVEKARQVGISKIEITNDPREAVKGADIVYTDVWASMGQKEEAEKRREAFKGFQVDQSLMDIAGSKALFMHCLPAEKGVEVTEEVIEGPKSIIFPQAENRLHAQNGIMLHVLGK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3255 372 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 69 371 IPR024904 GO:0004585|GO:0006591
Lja5g3255 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 30 371 - -
Lja5g3255 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 198 209 IPR006130 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 335 358 IPR006130 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 323 332 IPR006130 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 116 135 IPR006130 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 PRINTS Ornithine carbamoyltransferase signature 187 201 IPR002292 GO:0016743
Lja5g3255 372 PRINTS Ornithine carbamoyltransferase signature 114 128 IPR002292 GO:0016743
Lja5g3255 372 PRINTS Ornithine carbamoyltransferase signature 147 160 IPR002292 GO:0016743
Lja5g3255 372 PRINTS Ornithine carbamoyltransferase signature 349 360 IPR002292 GO:0016743
Lja5g3255 372 PRINTS Ornithine carbamoyltransferase signature 287 297 IPR002292 GO:0016743
Lja5g3255 372 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 217 368 IPR006131 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 69 371 IPR036901 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 Gene3D Aspartate/ornithine carbamoyltransferase 70 200 IPR036901 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 70 211 IPR006132 GO:0006520|GO:0016743
Lja5g3255 372 Gene3D Aspartate/ornithine carbamoyltransferase 201 366 IPR036901 GO:0006520|GO:0016597|GO:0016743
Lja5g3255 372 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 70 370 IPR002292 GO:0016743
Lja5g3255 372 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 30 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3255 Lja-Chr5 62850083 62853656 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3255 K00611 - gmx:100775828 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3255 5 62850083 62853656 Lja5g3255 5 62850083 62853656 ECH