Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3223 ATGCCATCCAGTTACTTTTCAAGGGTTGGAACTGCAATTCAGAGGTCAATTGCGGGGAAACAAGGCGAGTTTCGTGACTCTGCTGAGGTTCTTATTGGACAAGGGAAGCTCTTGTTCGGTGGTTCAAGGCTTTCCCATTCTGGGTATAGATTGTCTTGTGTGGAACCTCGCTCGGTTGCCACGGGTGCCGGTATTATTGCATTAGCTTCAAGATCAGAAAGAAAGGGGTTTTCTGTGGTTGACGCTCTGTCGAGGACGCTTTCGGTTCCTTCTGTGTCGGGGCCTTCAATTCAGATCTGTGGATACCATTCTGGACCTGAAAAGTTTTCAGCTGGTGCCAGGTTTCAGGTGAAAACTATGGCGGCTCGCTTGCCTGGTGCTGTGGTTGGTGAATGCTGTTTGGATAACAGAACTTTGAAGGGTGGTCGCCGGTCACTGTCGACAAAGAATAGCAGTAGTAATGTCTGTTTGAGCGCTGGTTTGAGGAATGGCGGAAGAGTGAGCATGAGTTTGAAGAACCACCATCAGCCAGATAGCCGTTCAATTTATAGCTATTTTGTTTATAATGTTGCAAAGAATTGGTGCGGCGCTTTCTCTCATTTGCAGTCAGGGTCTGGAGATTTTCATACTTCGTCGACTTCTTGTTACACTGTTGGTCCTGCTCAGGATGTGCCTTTTGAAACTTCTGCCCGCGAGGAGAAGCCAGCAAATTCTGCAGATTCATCTGAACAGAAAGCTCCTTCTGGCAAAACCCTTAAGTTAGTATCAGGATCGTGCTACTTGCCTCATCCTGATAAAGAAGATACTGGTGGAGAAGATGCTCATTTTATATGTTCTGAGGAACAGGCAATAGGGGTGGCAGATGGTGTTGGTGGTTGGGCAGATCTTGGTGTTAATTCTGGATTTTATTCTCGTGAGCTCATGTCCCACTCAGTGGAAGCTATTCGGGAGGAGCCCAAAGGTTCAGTTGATCCAGCTAGGGTGTTGGAGAAAGCACACTCAAGTACAAAAGCTAGGGGTTCCTCTACAGCATGCATTATTGCACTCACTGACCAGGGGCTTCATGCTATTAATTTGGGGGACAGTGGGTTTATGGTGGTCCGTGATGGGTGCACTATATTTCGGTCCCCAGTGCAGCAACATGATTTCAATTTCACCTATCAGCTAGAATGTGGCAGTAATGGTGATTTACCTAGTTCTGGCCAGGTTTTTACAATTCCTATTGCTCCCGGGGATGTCATCGTTGCCGGCACTGATGGGCTGTTTGATAACCTTTACAACAATGAGATTACAGCGGTGGTGGTTCATGCCGTGAGAGCAAACCTAAGCCCTCAGGTGACAGCACAGAAGATAGCTGCATTGGCACGTCAACGGGCACTTGATAAGGACAGACAGACCCCATTCTCTACAGCTGCTCAAGATGCTGGATTCCGTTACTATGGTGGCAAGCTTGATGATACTACGGTCGTTGTTTCATATATTACTGGCTCTGGAGATGCATGA 1503 0.4737 MPSSYFSRVGTAIQRSIAGKQGEFRDSAEVLIGQGKLLFGGSRLSHSGYRLSCVEPRSVATGAGIIALASRSERKGFSVVDALSRTLSVPSVSGPSIQICGYHSGPEKFSAGARFQVKTMAARLPGAVVGECCLDNRTLKGGRRSLSTKNSSSNVCLSAGLRNGGRVSMSLKNHHQPDSRSIYSYFVYNVAKNWCGAFSHLQSGSGDFHTSSTSCYTVGPAQDVPFETSAREEKPANSADSSEQKAPSGKTLKLVSGSCYLPHPDKEDTGGEDAHFICSEEQAIGVADGVGGWADLGVNSGFYSRELMSHSVEAIREEPKGSVDPARVLEKAHSSTKARGSSTACIIALTDQGLHAINLGDSGFMVVRDGCTIFRSPVQQHDFNFTYQLECGSNGDLPSSGQVFTIPIAPGDVIVAGTDGLFDNLYNNEITAVVVHAVRANLSPQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYITGSGDA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3223 500 SUPERFAMILY PP2C-like 258 491 IPR036457 -
Lja5g3223 500 Gene3D - 397 497 IPR036457 -
Lja5g3223 500 Pfam Stage II sporulation protein E (SpoIIE) 283 492 IPR001932 -
Lja5g3223 500 ProSiteProfiles PPM-type phosphatase domain profile. 258 494 IPR001932 -
Lja5g3223 500 PANTHER PROTEIN PHOSPHATASE 84 499 - -
Lja5g3223 500 SMART PP2C_4 245 492 IPR001932 -
Lja5g3223 500 Gene3D - 265 390 IPR036457 -
Lja5g3223 500 SMART PP2C_SIG_2 267 494 IPR001932 -
Lja5g3223 500 PANTHER PROTEIN PHOSPHATASE 2C 84 499 IPR039123 -
Lja5g3223 500 MobiDBLite consensus disorder prediction 228 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3223 Lja-Chr5 62367300 62372029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3223 K17508 - gmx:100805475 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3223 5 62367300 62372029 Lja5g3223 5 62367300 62372029 ECH