Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3221 ATGAAATTGAAGTCTAAGAAAGGATGGAAATCTATTGTACCTCTTCATTTGAAAGGAAAGTCAGCGACTCGCTTTTCTTTATTTCGCAAAGTTAATTCAGCTAGCTATGGACCTGGCAAAACACCAGTTTATCTGAATGTGTATGACTTGACACCCATGAATGGTTATGTGCATTGGGCTGGTCTTGGTATATATCACTCTGGTGTAGAAGTTCATGGTGTAGAATACGCATTTGGAGCTCATGACTACGCAACAAGCGGTGTTTTTGAGGTTGAACCTCGGCAATGCCCAGGCTTCAAATTCAGGAAGTCAATATTCATTGGAACTACATCTTTGGATTCTGTTCAGGTTAGGGAGTTCATGGAACGCCAGTCAGCAAGCTACAATGGTGACACGTATCACTTGATTGTTAAGAACTGCAATCACTTCTGCAAAGACATCTGCTTCAAGCTGACAGGGAAATCAATTCCAAAGTGGGTTAATCGACTAGCCAGGCTAGGTTCAATTTGCAACTGCATTCTTCCTGAAGCACTGAAAATTTCTGCTGTGGGACATGATCCTGATTGTCAGCCTCGTGATAGTGAAAAGAGAAGGCTTCGAAACTCCTTCAATTCCCTGTCCTCGATCTCCATGCGTCAAAAGCAACTGTCTAAATCTTCACTATTTCTGCAGTCGCCACTAAGAGGGTGCTTGTCGTCATCCTGGCCCTCGTGGGAGTTGAGGAAGTCCATTAATCGCTCCTTGAAAGAAAGGTAA 756 0.4325 MKLKSKKGWKSIVPLHLKGKSATRFSLFRKVNSASYGPGKTPVYLNVYDLTPMNGYVHWAGLGIYHSGVEVHGVEYAFGAHDYATSGVFEVEPRQCPGFKFRKSIFIGTTSLDSVQVREFMERQSASYNGDTYHLIVKNCNHFCKDICFKLTGKSIPKWVNRLARLGSICNCILPEALKISAVGHDPDCQPRDSEKRRLRNSFNSLSSISMRQKQLSKSSLFLQSPLRGCLSSSWPSWELRKSINRSLKER* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3221 251 PANTHER DESI-LIKE PROTEIN 2 251 - -
Lja5g3221 251 Pfam PPPDE putative peptidase domain 42 176 IPR008580 GO:0008233
Lja5g3221 251 SMART DUF862_2a 41 179 IPR008580 GO:0008233
Lja5g3221 251 Gene3D PPPDE domains 37 185 IPR042266 -
Lja5g3221 251 ProSiteProfiles PPPDE domain profile. 41 178 IPR008580 GO:0008233
Lja5g3221 251 PANTHER DESUMOYLATING ISOPEPTIDASE 2 251 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3221 Lja-Chr5 62346185 62350526 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3221 K22763 - gmx:100788399 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3221 5 62346185 62350526 Lja5g3221 5 62346185 62350526 ECH