Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3220 ATGGAGTCCGAACTCCAAGACCTGAATGCAAAACCGCCCAAACAACCCGACCCGACCCGCGATGACCGCCCCCTCCTCAACTCCGTTTCCGTCCCCTCCGCCGCCGCCACCATCTCCATCACCGAACTCGAGAACAAATTCGCGCCGTTCGTGCGGCGCGATGCGTACGGCGCCATGGGGCGCGGCAAGCTTCCGACGAGGGAGAAGGTGCTGCTTGGCCTGGCGCTCGTGACGCTGGTTCCGGTGAGGTTGGTTGCGGCGACTGCTATATTGGTGGTGTATTACTTGATCTGCAGGGTTTGTACATTGTGCTCTGGTCCTAATCGAGAGGAGGAAGAGGATCAGGAGGGTTACGCGCACCTCGTTGGGTGGAGGAGGATCGTGATTGTGCAGTGCGGGAGAGCGCTCTCCAGGCTCATGCTTTTCGTTTTAGGGTTCTATTGGATCTCCAAATCATATAGCATTCCTCAGACTCATGCCACCACCGAGGAAAACAAAGGTCAGCCTGAAGCGATGGGAAGACCGGGAGTAATAATATCGAATCATGTGTCCTACTTGGATATTTTTTATCACATGTCTTCCTCGTTCCCGAGTTTCGTTGCCAAGAGATCAGTGGCTAAACTTCCGCTTGTTGGTCTCATCAGTAAGTGTCTTGGTTGTATCTACGTTCAACGGGAATCGAAATCATCAGACTTCAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTAGAGAAGCTCATCAAAATATGTCTGCTCCGATGATGATGTTATTTCCAGAAGGTACAACCACAAATGGAGAATTTCTCCTTCCATTCAAGACTGGTGGTTTTTTGGCAACTGCACCGGTACTTCCTGTAATTTTAAATTACCATTACCAGAGATTTAGCCCTGCCTGGGATTCCATATCCGGGGTACGCCATGTAATTTTTCTTCTATGTCAATTTGTAAATTATATGGAGGTGATACAGTTACCTACTTATTATCCCTCGCAGCAGGAGAAGGCGTCTGCTAAAGTATATGCTAACAATGTTAGAAGGTTGATGGCCAGTGAGGGTAATTTCATACTTTCAGATATTGGGCTAGCTGAAAAACGAATATATCACGCTACTCTTAATGGTTTGTCATCCCAATGCTAG 1137 0.4846 MESELQDLNAKPPKQPDPTRDDRPLLNSVSVPSAAATISITELENKFAPFVRRDAYGAMGRGKLPTREKVLLGLALVTLVPVRLVAATAILVVYYLICRVCTLCSGPNREEEEDQEGYAHLVGWRRIVIVQCGRALSRLMLFVLGFYWISKSYSIPQTHATTEENKGQPEAMGRPGVIISNHVSYLDIFYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCIYVQRESKSSDFKGVSAVVTERIREAHQNMSAPMMMLFPEGTTTNGEFLLPFKTGGFLATAPVLPVILNYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVIQLPTYYPSQQEKASAKVYANNVRRLMASEGNFILSDIGLAEKRIYHATLNGLSSQC* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3220 378 Pfam Acyltransferase 168 279 IPR002123 GO:0016746
Lja5g3220 378 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 163 359 - -
Lja5g3220 378 SMART plsc_2 176 291 IPR002123 GO:0016746
Lja5g3220 378 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 9 373 - -
Lja5g3220 378 MobiDBLite consensus disorder prediction 1 26 - -
Lja5g3220 378 CDD LPLAT_LPCAT1-like 138 365 IPR045252 GO:0008374
Lja5g3220 378 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 9 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3220 Lja-Chr5 62339858 62345328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3220 1 374 Acyl Lipid Metabolism Gene Families AT1G80950 62.245 1.11e-171 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3220 K13510 - gmx:100820536 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3220 5 62339858 62345328 Lja5g3220 5 62339858 62345328 ECH