Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3210 ATGGGATTCACAATAATAGAGCCTCTCAAATATTGGCTACTAGACCACCCCTCCATAGTGTGGTTCCGGTGGAGCCCCGCCCAATCATGGGGCTCCACGTGGCCATTCCTAGCCACCGCCATCGCCGCCTACATCACCACCGCAGTCACCCTCCACCTCACCCTAAAACTCTTCCGGCGCCGCCGCCCCATCCCGCTAGGCCCCATTCCGGCAATCCACGGCCTCGCCATGTCACTCCTCTCCGCCACCATCTTCGCCGGCACGCTCCTCTCTGCCGCCGCCGAAATTCGCGACACACGGTGGCTATGGCGGCGCACGAGAACCACCCCAATGGAGTGGTTCCTCTGTTTCCCACTCGGGACCCGCCCCTCCGGCCGTGTCTTCTTCTGGTCCTACATCTTCTACCTCTCACGGTTCCTCCACCTGCTCCGAACCTTCTTCATCATCCTCCGCCACCGGAAGCTCTCGTTCTTCAGGCTCTTCAACCACTCCATCCTCCTCCTCACCTCGTTCCTCTGGCTTGAATTTTCACAGTCGTTTCAGGTTCTGGCGATTCTGTTCTCGACGTTGGTTTACTCTGTTGTTTACGGGTACAGATTCTGGAATGAAATGGGGTTTCCTTGTAACAAGCGCTTTTCGTTCACCGTGAATTGCCAGATTCTGCTTCTGGGTTGTAACTTGGTTTGTCACGTTGGGGTGCTCTGTTTGCATTTTCTGAGAGGTGGGTGTAATGGGATTGGAGCTTGGGTGTTCAACTCTGTTCTGAATGCTGCTATTCTTTTCCTCTTTTTGAAGTCCTATGTGAATGTGCATTGCACAAGGAAGAACACAAGTACTGGAATTGCAACTAAAAGAAAGAAAAATAAATTATCTAGATAA 879 0.529 MGFTIIEPLKYWLLDHPSIVWFRWSPAQSWGSTWPFLATAIAAYITTAVTLHLTLKLFRRRRPIPLGPIPAIHGLAMSLLSATIFAGTLLSAAAEIRDTRWLWRRTRTTPMEWFLCFPLGTRPSGRVFFWSYIFYLSRFLHLLRTFFIILRHRKLSFFRLFNHSILLLTSFLWLEFSQSFQVLAILFSTLVYSVVYGYRFWNEMGFPCNKRFSFTVNCQILLLGCNLVCHVGVLCLHFLRGGCNGIGAWVFNSVLNAAILFLFLKSYVNVHCTRKNTSTGIATKRKKNKLSR* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3210 292 Pfam GNS1/SUR4 family 32 277 IPR002076 GO:0009922|GO:0016021
Lja5g3210 292 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 8 282 IPR002076 GO:0009922|GO:0016021
Lja5g3210 292 PANTHER F25A4.4 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3210 Lja-Chr5 62180247 62182136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g3210 6 279 Acyl Lipid Metabolism Gene Families AT1G75000 64.057 7.06e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3210 - - qsu:112011994 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3210 5 62180247 62182136 Lja5g3210 5 62180247 62182136 ECH