Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3070 ATGATGAGGAGCAAGGGGCAGAGCCAGAGCATGTTCATGAAGATCATGGCTTCACCATTCAGAGCACTTGGAAGAGCAAGGGATGCTTATGTTCGCAGCATCACGACTTGTGGTCAGAGTGTGAGTTATGGCAACCCCATGGACCCTGCAGGGAGGTTCTCTTCTCTGTCAAGGAGCCAGAGCGTGGCCACTTCGCGGTCGGGCGATGGCGATGATTATGCAGAGCTCTTGAGGGCTGCATCTGCTAGAACCATGGTTGGTAGAATTGACATGGATTTGATTCTGAAACAGCAGCAGCTTCAGCAACAGCAGCAGCATCGTTATCACACTGAGGGACCAAAAGGGTCCAAGTTGCCAAAGTCTAGCAGTGTTGGGATGGGTAGGATTGATGAGGAGACACCTTATGATACCTCAGAAGGGGGTGTTGCTTTTGTGGCACCTGATTCATACCCGAGAAGTAAGAGCTATGCTGTGGGAAAGAGAAACGTTGCTTTCTGA 498 0.506 MMRSKGQSQSMFMKIMASPFRALGRARDAYVRSITTCGQSVSYGNPMDPAGRFSSLSRSQSVATSRSGDGDDYAELLRAASARTMVGRIDMDLILKQQQLQQQQQHRYHTEGPKGSKLPKSSSVGMGRIDEETPYDTSEGGVAFVAPDSYPRSKSYAVGKRNVAF* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3070 165 MobiDBLite consensus disorder prediction 100 141 - -
Lja5g3070 165 PANTHER - 2 163 - -
Lja5g3070 165 PANTHER OS07G0123800 PROTEIN 2 163 - -
Lja5g3070 165 PIRSF UCP031279 2 165 IPR016972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3070 Lja-Chr5 60187803 60189063 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g3070 - - gmx:100798910 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3070 5 60187803 60189063 Lja5g3070 5 60187803 60189063 ECH
Lja5g3070 5 60187803 60189063 Lja1g4087 1 51905999 51907134 PCT